Wang, C., Xie, W., Zhu, Y. ...
· genetics
· Xiangya Hospital Central South University Department of Orthopedics
· biorxiv
Background: Currently, the link between cardiovascular diseases and sarcopenia is increasingly garnering attention from researchers. However, studies exploring the association between cardiac structure and sarcopenia are sparse. This study aims to investigate the potential geneti...
Background: Currently, the link between cardiovascular diseases and sarcopenia is increasingly garnering attention from researchers. However, studies exploring the association between cardiac structure and sarcopenia are sparse. This study aims to investigate the potential genetic links between cardiac structural features and sarcopenia. Methods: During the discovery phase, we employed Linkage Disequilibrium Score Regression (LDSC) and Mendelian Randomization (MR) to assess the genetic correlation and causality between traits related to cardiac structure and sarcopenia, with further validation of the results using validation set data. In the study, we established a scoring system to identify high-confidence trait pairs. For these pairs, we conducted sensitivity analyses to assess their heterogeneity and pleiotropy. Additionally, we undertook follow-up studies of these trait pairs, including using mediation analysis to evaluate the potential mediating effects of lipids, and enrichment analysis to explore possible shared biological pathways linking these characteristics. Results: The genetic correlation analyses during the discovery and validation phases identified 5 pairs (in forward analysis) and 16 pairs (in reverse analysis) of high-confidence trait pairs. As a key sarcopenia-related feature, appendicular lean mass (ALM) exhibited positive causal relationships with several cardiac structural features, including the volumes of the left and right atria. Mediation analysis suggested that certain lipids, such as phosphatidylcholine, might mediate these causal relationships. Notably, gene and pathway enrichment analyses revealed that genes associated with significant SNPs in high-confidence trait pairs were enriched in multiple key biological processes and pathways, such as tube morphogenesis, cardiac right ventricle morphogenesis, and muscle system processes in the forward analysis, as well as skeletal system development, heart development, and hemopoiesis in the reverse analysis. Cell-type enrichment analysis pointed to endothelial cells, smooth muscle cells, fibroblasts, and mesenchymal stem cells. Conclusions: This study provides evidence for genetic relationships between cardiac structures and sarcopenia-related traits. These findings may enhance our understanding of the biological mechanisms underlying age-related diseases and provide scientific basis for developing future preventive and therapeutic strategies.
Longevity Relevance Analysis
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The paper claims that there are genetic correlations between cardiac structural features and sarcopenia-related traits. This research is relevant as it explores the underlying biological mechanisms linking cardiovascular health and muscle deterioration, which are critical aspects of aging and age-related diseases.
Qian Zhang, Bing Bai, Lidan Ran ...
· Scientific reports
· Integrative Medicine & Healthy Center, The First People's Hospital of Zunyi, The Third Affiliated Hospital of Zunyi Medical University, 98 Fenghuang Road, Zunyi, 563002, Guizhou, China. [email protected].
· pubmed
Chronic kidney disease (CKD) is highly prevalent, incurable, and lacks effective treatments. Aging is closely linked to various kidney diseases. In this study, we combined CKD and aging using bioinformatics approaches to identify potential anti aging drugs and therapeutic targets...
Chronic kidney disease (CKD) is highly prevalent, incurable, and lacks effective treatments. Aging is closely linked to various kidney diseases. In this study, we combined CKD and aging using bioinformatics approaches to identify potential anti aging drugs and therapeutic targets for CKD. We analyzed datasets GSE37171 and GSE66494 from the GEO database, identifying 317 differentially expressed genes (DEGs). By intersecting these DEGs with aging related genes, we identified 23 aging associated differential genes (ARDEGs). A protein-protein interaction (PPI) network was constructed using the STRING database, and the top 10 hub ARDEGs were identified using Cytoscape software. Potential anti aging drugs, including Cinnamaldehyde, were identified through the ceRNA and transcription factor regulatory networks, as well as the DGldb database. Among the key regulatory genes identified in CKD patient samples were SOD2, FGF21, FOS, RELA, DDIT4, BMI1, DUSP6, LGALS3, CXCR2, and CEBPB. Cinnamaldehyde and other drugs were found to target aging associated pathways, suggesting their potential to delay CKD progression through modulating these pathways. Finally, we verified the low-expression of DDIT4 and DUSP6, the two targets of Cinnamaldehyde, in unilateral ureteral obstruction (UUO) animal model. Additionally, Cinnamaldehyde was shown to reduce the expression of fibrosis markers such as fibronectin (FN) and α-smooth muscle actin (α-SMA) in HK2 cells under TGF-β1 stimulation. This study provides a foundational understanding of aging related molecular targets in CKD and offers new directions for developing anti aging therapies to treat CKD.
Longevity Relevance Analysis
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The study identifies potential anti-aging drugs and therapeutic targets for chronic kidney disease (CKD) by linking aging-related genes to CKD pathology. This research is relevant as it explores the intersection of aging and CKD, aiming to address underlying mechanisms of aging that contribute to disease progression.
Lei Li, Guangzhi Zhang, Zhili Yang ...
· Molecular medicine (Cambridge, Mass.)
· Department of Orthopedics, Lanzhou University Second Hospital, Lanzhou, Gansu, 730000, P.R. China.
· pubmed
Cellular dysfunction induced by senescent nucleus pulposus (NP) cells is a key factor in the pathogenesis of intervertebral disc degeneration (IDD). Stathmin 1 (STMN1) has been proposed as a telomere-associated senescence marker implicated in senescence in many age-related diseas...
Cellular dysfunction induced by senescent nucleus pulposus (NP) cells is a key factor in the pathogenesis of intervertebral disc degeneration (IDD). Stathmin 1 (STMN1) has been proposed as a telomere-associated senescence marker implicated in senescence in many age-related diseases. Nevertheless, its role in NP cell senescence remains unclear. This study revealed that STMN1 was significantly upregulated in human degenerative and naturally aged rat NP tissue specimens. In vitro models demonstrated that STMN1 expression levels were elevated in replicative and TNF-α-induced NP senescence models. Lentiviral knockdown of STMN1 inhibited NP cell senescence, while overexpression promoted NP cell senescence, along with extracellular matrix (ECM) degradation. An in-depth mechanism indicated that insulin-like growth factor-binding protein 5 (IGFBP5), a downstream pro-senescence gene of STMN1, can induce NP cellular senescence and ECM degradation following its upregulation by STMN1. Furthermore, STMN1 knockdown reduced IGFBP5 expression and mitigated IDD development in a rat model of caudal discs puncture-induced IDD. Combined with the abovementioned results, we demonstrated for the first time that the STMN1-IGFBP5 axis can induce NP cell senescence and ECM degradation, thereby accelerating IDD development. This provides a robust foundation for the development of molecular-targeted therapies for IDD.
Longevity Relevance Analysis
(4)
The paper claims that the STMN1-IGFBP5 axis induces senescence and ECM degradation in nucleus pulposus cells, contributing to intervertebral disc degeneration. This research addresses the mechanisms underlying cellular senescence, which is a key factor in aging and age-related diseases, thus providing insights that could lead to interventions targeting the root causes of aging.
Mohammed, S., Jiang, C., Pennington, T. ...
· cell biology
· University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, USA
· biorxiv
Liver aging is characterized by chronic inflammation and metabolic dysfunction that contributes to the progression of metabolic dysfunction-associated steatotic liver disease (MASLD). Necroptosis, a form of inflammatory cell death, is activated in aging livers, and genetic (Ripk3...
Liver aging is characterized by chronic inflammation and metabolic dysfunction that contributes to the progression of metabolic dysfunction-associated steatotic liver disease (MASLD). Necroptosis, a form of inflammatory cell death, is activated in aging livers, and genetic (Ripk3-/- or Mlkl-/- mice) or pharmacological (RIPK1 inhibitor necrostatin-1s) inhibition of necroptosis attenuates liver inflammation and pathology. However, the cell type-specific role of necroptosis in liver aging remains unclear. Given that MLKL is expressed in hepatocytes, and its expression increases with age, we generated hepatocyte-specific MLKL-overexpressing mice (MLKLHepOE) to determine its role in liver aging. Unexpectedly, MLKL overexpression in hepatocytes did not induce necroptosis, but instead upregulated markers of cellular senescence (cell cycle arrest genes and SASP factors), increased macrophage infiltration, and elevated M1 macrophage marker expression. Electron microscopy and mitochondrial analyses revealed abnormal mitochondrial morphology, elevated oxidative stress, and disrupted mitochondrial dynamics, while lipidomics demonstrated alterations in hepatic lipid metabolites. In agreement with our observations in MLKLHepOE mice, MLKL overexpression in AML12 hepatocytes impaired mitochondrial respiration, increased proinflammatory extracellular vesicle (EV) release, and induced senescence markers, without triggering cell death. Together, these findings reveal a non-lethal, non-necroptotic role for MLKL in promoting hepatocyte senescence and metabolic dysfunction via mitochondrial impairment and EV-mediated inflammation. Our study highlights MLKL as a novel driver of liver inflammaging and a potential therapeutic target for age-related liver disease.
Longevity Relevance Analysis
(4)
MLKL overexpression in hepatocytes promotes cellular senescence and mitochondrial dysfunction, contributing to liver aging. The study addresses a potential root cause of aging-related liver disease, focusing on the role of MLKL in the aging process rather than merely treating symptoms.
Long, J., Ma, M., Chen, Y. ...
· molecular biology
· University of electronic science and technology of China
· biorxiv
The regulation of cellular metabolism and growth in response to nutrient availability is crucial for cell survival and can significantly impact on lifespan. Central to this regulation is a class of transporters that sense and transport specific nutrients and transduce the signal ...
The regulation of cellular metabolism and growth in response to nutrient availability is crucial for cell survival and can significantly impact on lifespan. Central to this regulation is a class of transporters that sense and transport specific nutrients and transduce the signal downstream to control genes responsible for growth and survival. In this study, we identified SUL1, a plasma membrane transporter responsible for regulating the entry of extracellular sulfate in Saccharomyces cerevisiae, as a key gene for regulating lifespan. We conducted a systematic analysis to delineate the downstream mechanism underlying the lifespan extension by SUL1 deletion. Surprisingly, we found that the lifespan extending effect of SUL1 deletion is not due to decreased sulfate transport. The SUL1 deletion mutant exhibited decreased PKA signaling, resulting in a series of downstream effects, including increased stress-protective trehalose and glycogen, increased nuclear translocation of MSN2, elevated expression of general stress response genes, enhanced autophagy, and reduced expression of amino acid biosynthetic and ribosomal genes. We demonstrated that the observed increase in lifespan is dependent on MSN2 and autophagy pathways. Our findings exemplify the influence of nutrient signaling rather than the nutrient itself on lifespan regulation and further substantiate the pivotal role of the PKA pathway in this process.
Longevity Relevance Analysis
(4)
Deletion of the sulfate transporter SUL1 extends yeast replicative lifespan via reduced PKA signaling. The study identifies a mechanism by which nutrient signaling influences lifespan regulation, contributing to the understanding of aging processes.
Duan C Copeland, Oliver L Kortenkamp, Brendon M Mott ...
· Animal microbiome
· USDA-ARS Carl Hayden Bee Research Center, 2000 E. Allen Rd, Tucson, AZ, 85719, USA. [email protected].
· pubmed
Understanding the biological mechanisms underlying extreme lifespan variation within species remains a fundamental challenge in aging research. Here, we investigated the role of gut microbiota and age in honey bee (Apis mellifera) queens combining 16S rRNA gene sequencing and tra...
Understanding the biological mechanisms underlying extreme lifespan variation within species remains a fundamental challenge in aging research. Here, we investigated the role of gut microbiota and age in honey bee (Apis mellifera) queens combining 16S rRNA gene sequencing and transcriptomics. Analysis of 40 queen hindguts revealed that Commensalibacter melissae (Alpha 2.1) relative abundance was significantly higher in young queens compared to old queens. Using queens with the highest and lowest C. melissae relative abundance, RNA sequencing identified 1451 differentially expressed genes associated with C. melissae abundance, twice the number associated with age alone (719 genes). Queens with high C. melissae abundance showed distinct transcriptional profiles related to stress response, protein homeostasis, and longevity-regulating pathways, particularly genes involved in oxidative stress response and cellular maintenance. Our analysis revealed complex relationships between age, C. melissae abundance, and gene expression patterns, suggesting that multiple interacting factors contribute to queen quality. These findings contribute to our understanding of host-microbe interactions in honey bee queens and highlight the intricate relationship between gut microbiota composition and host physiology in honey bees.
Longevity Relevance Analysis
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The paper claims that the abundance of the gut symbiont Commensalibacter melissae in honey bee queens influences gene expression related to longevity and stress response. This research explores the biological mechanisms of aging through host-microbe interactions, contributing to the understanding of factors that may influence lifespan variation.
Sato, M., Tanabu, D., Torigoe, D. ...
· biochemistry
· Gakushuin University
· biorxiv
Mitochondria play a central role in cellular energy metabolism and homeostasis, and their dysfunction is closely linked to the progression of age-related diseases. The mitochondrial ubiquitin ligase MITOL (also known as MARCHF5) is a key regulator of mitochondrial dynamics and fu...
Mitochondria play a central role in cellular energy metabolism and homeostasis, and their dysfunction is closely linked to the progression of age-related diseases. The mitochondrial ubiquitin ligase MITOL (also known as MARCHF5) is a key regulator of mitochondrial dynamics and function, and reduced MITOL expression in the mouse heart has been implicated in mitochondrial dysfunction and cardiac aging. In this study, we identified berberrubine as a compound that promotes MITOL expression and activates mitochondria. We further assembled a group of berberrubine-based compounds, including its quinoid form and a newly developed water-soluble derivative, and collectively named them \'Mitorubin\' as mitochondria-activating compounds with therapeutic potential. While conventional berberrubine has poor water solubility, the addition of acetic acid significantly improved its solubility, enabling formulation as a solution. Mitorubin enhanced MITOL expression in cultured cells, increased mitochondrial DNA content and expression of mitochondrial proteins, and promoted mitochondrial respiration. In a model of age-related cardiac dysfunction, oral administration of Mitorubin restored mitochondrial function, improved cardiac performance, suppressed myocardial hypertrophy, and alleviated pulmonary congestion. Moreover, Mitorubin did not shorten lifespan in aged mice and significantly extended lifespan in high-fat diet-fed mice, suggesting both safety and efficacy under chronic administration. These findings suggest that Mitorubin is a promising mitochondrial activator and may represent a novel therapeutic strategy for age-related diseases.
Longevity Relevance Analysis
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Mitorubin enhances mitochondrial function and exhibits cardioprotective effects against age-related cardiac dysfunction. The study addresses mitochondrial dysfunction, a root cause of aging, and proposes a novel therapeutic strategy that could potentially mitigate age-related diseases.
Runqing Shi, Gong Chen, Yusheng Zhang ...
· Journal of muscle research and cell motility
· Department of Gerontology, The First Affiliated Hospital with Nanjing Medical University, Nanjing, China.
· pubmed
Primary sarcopenia, an age-related syndrome, is a serious threat to the health and longevity of the elderly. Our prior studies indicated that thyroid hormone (TH) activity within muscle tissue undergoes significant age-associated alterations, mainly evidenced by a reduction in th...
Primary sarcopenia, an age-related syndrome, is a serious threat to the health and longevity of the elderly. Our prior studies indicated that thyroid hormone (TH) activity within muscle tissue undergoes significant age-associated alterations, mainly evidenced by a reduction in thyroid hormone receptor α (TRα) expression over time. TRα regulates the transcription of downstream target genes to exert its biological effects. Although TH is essential for skeletal muscle growth and development, the specific regulatory mechanism and broader role of TH binding its receptors in skeletal muscle aging remain unclear. We used ChIP-seq and RNA-seq to explore the aging changes of TRα target genes in gastrocnemius muscle of natural aging mouse model. ChIP-seq analysis revealed that TRα target genes are involved in nutrient synthesis, energy production, hormone secretion, and ECM-related pathways, suggesting a potential role of TRα in muscle growth, metabolism and component regulation. Further integration of RNA-seq showed that a greater number of down-regulated TRα target genes are associated with skeletal muscle aging. Through GSEA analysis and RT-qPCR screening, Col6a1 was identified as a key target gene. Col6a1 encodes collagen VI which is an important component of the ECM, ECM disorders and abnormal expression of Col6a1 can affect cell proliferation and differentiation. We confirmed that knockdown of Col6a1 inhibited the proliferation and differentiation of C2C12 cells. ChIP-qPCR and TRα silencing in C2C12 cells showed that TRα positively regulates Col6a1 transcription, and TRα deficiency inhibits the proliferation and differentiation of myoblasts, which is probably associated with Col6a1. These findings provide new insights into the molecular mechanisms underlying skeletal muscle aging and the regulatory roles of TH-TRα interactions.
Longevity Relevance Analysis
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Thyroid hormone receptor α deficiency affects skeletal muscle myoblast proliferation and differentiation via Col6a1 during aging. The study addresses the molecular mechanisms underlying skeletal muscle aging, which is a critical aspect of the aging process and longevity research.
Xiuxing Liu, Yidan Liu, Yuehan Gao ...
· npj aging
· State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, Guangdong Provincial Key Laboratory of Ophthalmology and Visual Science, Guangzhou, 510060, China.
· pubmed
Aging of hematopoietic and immune system (HIS) leads to cellular senescence and immune dysregulation, contributing to age-related diseases. Here, we show that Procyanidin C1 (PCC1), a compound with both senolytic and senomorphic properties, can counteract aging-related changes in...
Aging of hematopoietic and immune system (HIS) leads to cellular senescence and immune dysregulation, contributing to age-related diseases. Here, we show that Procyanidin C1 (PCC1), a compound with both senolytic and senomorphic properties, can counteract aging-related changes in HIS. Using single-cell RNA sequencing and validation experiments, we found that aging induced cellular senescence, inflammation, and immune dysregulation in the bone marrow and spleen tissues of mice. Long-term PCC1 treatment improved key physiological parameters especially the grip strength of aged mice. Further single-cell analysis revealed PCC1's broad geroprotective effects on HIS, including an increase in the proportion of B cells (BCs) and hematopoietic stem cells (HSCs), suppression of senescence-associated markers, and restoration of normal immune processes. Specifically, PCC1 mitigated inflammation and restored immune homeostasis in BCs by suppressing Cebpb expression and age-associated BCs. Moreover, PCC1 reversed aging-induced alterations in HSCs through upregulating Nedd4 and CD62L-Ca2+ axis expression. Finally, we identified senescent cells (SnCs) using machine learning and gene set enrichment analysis, revealing that PCC1 induced apoptosis of SnCs and regulated their metabolic processes, particularly in granulocytes and myeloid cells. The experimental validation further confirmed the senolytic and senomorphic effects of PCC1 both in vivo and in vitro. Overall, PCC1 holds potential as a therapeutic agent for alleviating immune dysfunction and promoting healthy aging via senolytic and senomorphic effects.
Longevity Relevance Analysis
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Procyanidin C1 can counteract aging-related changes in the hematopoietic immune system through senolytic and senomorphic effects. The paper addresses the root causes of aging by exploring a compound that mitigates cellular senescence and immune dysregulation, which are key factors in age-related diseases.
Neelam Anil Revankar, Siddaraju Anusha, Serva Peddha Muthukumar ...
· Gastrointestinal Microbiome
· Department of Fruit and Vegetable Technology, CSIR-Central Food Technological Research Institute, Mysuru, 570020, India.
· pubmed
The incidence of age-associated ailments has increased proportionately with the expansion of the aging demographic. This study aimed to evaluate the anti-aging potential of synbiotic pineapple beverage formulated with 100% pineapple juice, 1% inulin, and Lacticaseibacillus rhamno...
The incidence of age-associated ailments has increased proportionately with the expansion of the aging demographic. This study aimed to evaluate the anti-aging potential of synbiotic pineapple beverage formulated with 100% pineapple juice, 1% inulin, and Lacticaseibacillus rhamnosus ATCC 53103 (10 log CFU) in Caenorhabditis elegans and D-galactose age-induced mice. The synbiotic juice-treated nematodes exhibited a 24.52% increase in their lifespan, accompanied by lower levels of reactive oxygen species and improved structural functions. In vivo studies demonstrated that synbiotic treatment positively influences age-induced mice's cerebellar function and spatial memory. Additionally, the synbiotic beverage containing 8-10 log CFU of Lacticaseibacillus rhamnosus showed a protective effect against hippocampal neuron damage. The control group displayed a higher Firmicutes/Bacteroides (F/B) ratio, whereas the significantly lower F/B ratio in the diseased groups indicated a reversal of microbial imbalance caused by D-galactose exposure. Furthermore, the consumption of synbiotic beverage mitigated telomere shortening in aged mice. The results highlight the anti-aging effects of a pineapple beverage formulated with Lacticaseibacillus rhamnosus and inulin as a synbiotic intervention. This study suggests that dietary interventions incorporating prebiotics and probiotics may serve as promising strategy for combating age-related disorders and promoting healthy aging.
Longevity Relevance Analysis
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The paper claims that a synbiotic pineapple beverage can increase lifespan and improve cognitive function in aging models. This study is relevant as it explores dietary interventions that may address underlying mechanisms of aging and promote healthy aging, rather than merely treating age-related symptoms.
Diez, W. O., Ramirez, J. M., Mele, M.
· bioinformatics
· Barcelona Supercomputing Center
· biorxiv
Background: Understanding the consequences of individual DNA methylation variation is crucial for the study of human biology and disease. However, the collective impact of demographic traits on DNA methylation and subsequent gene expression across human tissues remains unexplored...
Background: Understanding the consequences of individual DNA methylation variation is crucial for the study of human biology and disease. However, the collective impact of demographic traits on DNA methylation and subsequent gene expression across human tissues remains unexplored. Here, we quantify the contributions of sex, age, genetic ancestry, and BMI on DNA methylation variation across 9 human tissues and 424 individuals from the Genotype-Tissue Expression project. Results: We observe that inter-individual DNA methylation variation is higher than inter-individual gene expression variation. We show that genetic ancestry and age have a greater impact on DNA methylation than does sex, with aging effects being more widespread but less pronounced. On average, less than 10% of the gene expression variation in sex, age, and ancestry is mediated by DNA methylation differences, with ancestry showing the largest percentage of mediation. We show that DNA methylation differences between populations accumulate at regions with outlier DNA methylation profiles (high/lowly methylated) and are largely under genetic control. The female genome is predominantly hypermethylated across tissues, likely driven by the polycomb repressive complex. Ultimately, we demonstrate how aging increases DNA methylation levels at targets of the polycomb repressive complex in most tissues except the gonads. Conclusions: Overall, our multi-individual and multi-tissue analysis provides a comprehensive characterization of the main drivers of human DNA methylation variation under healthy conditions, laying the foundations for clinical studies considering demographic perspectives.
Longevity Relevance Analysis
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The paper claims that genetic ancestry and age significantly influence DNA methylation variation across human tissues. This research is relevant as it explores the biological mechanisms underlying aging and DNA methylation, which are crucial for understanding the root causes of aging and potential interventions.
Wanwan Wang, Lei Wang, Rensong Sun ...
· Chemistry (Weinheim an der Bergstrasse, Germany)
· Department of Pharmaceutical Sciences, State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian, 116024, China.
· pubmed
Targeting senescent cells for cancer treatment is an important recent direction. In this work, we designed and synthesized a galactoside-functionalized pyridone endoperoxide. The endoperoxide in this form, releases singlet oxygen at a relatively slow rate, but when transformed by...
Targeting senescent cells for cancer treatment is an important recent direction. In this work, we designed and synthesized a galactoside-functionalized pyridone endoperoxide. The endoperoxide in this form, releases singlet oxygen at a relatively slow rate, but when transformed by β-galactosidase activity, the pyridone endoperoxide releases singlet oxygen with a half-life of 30 minutes at 37 °C. We also studied this compound with a variety of cell lines with differential β-galactosidase expression levels. Cytotoxicity of the target compound is enhanced in high galactosidase-expressing SKOV-3 cells. In vivo tests with tumor models also showed significant suppression of tumor progression. Targeting singlet oxygen to senescent cells appears to be promising new approach for treating diseases concurrent with aging, including cancer.
Longevity Relevance Analysis
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The paper claims that a galactoside-functionalized pyridone endoperoxide selectively targets senescent cells to release singlet oxygen, enhancing cytotoxicity in cancer treatment. This research is relevant as it addresses the role of senescent cells in aging and cancer, proposing a novel therapeutic approach that could potentially mitigate age-related diseases by targeting the underlying mechanisms of cellular senescence.
Romani Osbourne, Kelly M Thayer
· PLoS computational biology
· Department of Molecular Biology & Biochemistry, Wesleyan University, Middletown, Connecticut, United States of America.
· pubmed
The link between p53 tumor suppressive functions and organismal lifespan is multifaceted. Its DNA-repair mechanism is longevity-enhancing while its role in cellular senescence pathways induces pro-aging phenotypes. To understand how p53 may regulate organismal lifespan, cross-spe...
The link between p53 tumor suppressive functions and organismal lifespan is multifaceted. Its DNA-repair mechanism is longevity-enhancing while its role in cellular senescence pathways induces pro-aging phenotypes. To understand how p53 may regulate organismal lifespan, cross-species genotype-phenotype (GP) studies of the p53 DNA-binding domain (DBD) have been used to assess the correlation of amino acid changes to lifespan. Amino acid changes in non-DNA-binding regions such as the transactivation (TAD), proline-rich (PRD), regulatory (REG), and tetramerization (TET) are largely unexplored. In addition, existing GP correlation tools such as SigniSite do not account for phylogenetic relationships between aligned sequences in correlating genotypic differences to phenotypes such as lifespan. To identify phylogenetically significant, longevity-correlated residues in full-length p53 alignments, we developed a Python- and R-based workflow, Relative Evolutionary Scoring (RES). While RES-predicted longevity-associated residues (RPLARs) are concentrated primarily in the DBD, the PRD, TET, and REG domains also house RPLARs. While yeast functional assay enrichment reveals that RPLARs may be dispensable for p53-mediated transactivation, PEPPI and Rosetta-based protein-protein interaction prediction suggests a role for RPLARs in p53 stability and interaction interfaces of tumor suppressive protein-protein complexes. With experimental validation of the RPLARs' roles in p53 stability, transactivity, and involvement in senescence-regulatory pathways, we can gain crucial insights into mechanisms underlying dysregulated tumor suppression and accelerated aging.
Longevity Relevance Analysis
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The paper claims that specific amino acid changes in the p53 protein correlate with organismal lifespan and may influence tumor suppression and aging mechanisms. This research is relevant as it explores the molecular mechanisms underlying longevity and aging, focusing on p53's role in lifespan regulation rather than merely addressing age-related diseases.
Aging is associated with progressive tissue decline and shifts in stem cell clonality. The role of niche signals in driving these processes remains poorly understood. Using the Drosophila testis, we identify a regulatory axis in which age-related decline of niche signals (BMPs) l...
Aging is associated with progressive tissue decline and shifts in stem cell clonality. The role of niche signals in driving these processes remains poorly understood. Using the Drosophila testis, we identify a regulatory axis in which age-related decline of niche signals (BMPs) lead to upregulation of the co-repressor Hairless, which downregulates the RNA-binding protein Imp in aged germline stem cells (GSCs). Reduced Imp causes loss of Chinmo, a key factor in GSC aging and competition. Reduced Chinmo causes ectopic Perlecan secretion which accumulates in the testis lumen and causes GSC loss. Aging of the testis is reversed by increasing BMPs in the niche, or by overexpressing Imp or depleting Hairless in GSCs. Furthermore, GSC clones with reduced Imp or increased Hairless are more competitive, expelling wild-type neighbors and monopolizing the niche. Thus, BMPs regulate testicular niche aging through the Hairless/Imp/Chinmo axis and winning GSCs usurp these aging mechanisms.
Longevity Relevance Analysis
(4)
The paper claims that age-related declines in niche self-renewal factors control testis aging and spermatogonial stem cell competition through the Hairless, Imp, and Chinmo axis. This research addresses the mechanisms underlying aging in stem cells, which is directly relevant to understanding and potentially mitigating the root causes of aging.
Sarah Hoelzl, Tim P Hasenbein, Stefan Engelhardt ...
· Nature aging
· Institute of Pharmacology and Toxicology, Technical University Munich, Munich, Germany.
· pubmed
Decades ago, evidence of age-related reactivation of a single gene on the female inactive X chromosome was observed in mice. While stable silencing of the Barr body is crucial for balancing gene dosage between sexes, it remains unclear whether silencing is maintained during aging...
Decades ago, evidence of age-related reactivation of a single gene on the female inactive X chromosome was observed in mice. While stable silencing of the Barr body is crucial for balancing gene dosage between sexes, it remains unclear whether silencing is maintained during aging. Here we used allele-specific multi-omics approaches to capture a comprehensive catalog of genes escaping X chromosome inactivation throughout mouse development and aging. We found substantially elevated escape rates during aging across organs, occurring in multiple distinct cell types and concentrated at distal chromosome regions. Consistently, chromatin accessibility was increased across multiple megabases at chromosome ends, affecting regulatory elements of escapees. As several age-specific escapees are linked to human diseases, their elevated expression in females might contribute to sex-biased disease progression observed during aging.
Longevity Relevance Analysis
(4)
The paper claims that aging leads to increased reactivation of genes on the inactive X chromosome, which may contribute to sex-biased disease progression. This research is relevant as it explores the mechanisms of gene regulation during aging, potentially uncovering insights into the biological processes that underlie aging and age-related diseases.
Xian Cui, Shiqun Sun, Hui Zhang ...
· Journal of the American Heart Association
· Diagnostic Imaging Center, Shanghai Children's Medical Center School of Medicine, Shanghai Jiao Tong University Shanghai 200127 China.
· pubmed
Several DNA methylation (DNAm) algorithms have recently emerged as robust predictors of aging and adverse health outcomes in older adults, offering valuable insights into cardiovascular disease (CVD) risk stratification. However, their predictive performance for CVD varies signif...
Several DNA methylation (DNAm) algorithms have recently emerged as robust predictors of aging and adverse health outcomes in older adults, offering valuable insights into cardiovascular disease (CVD) risk stratification. However, their predictive performance for CVD varies significantly. This study aimed to systematically investigate the associations of 12 widely used DNAm algorithms with CVD and mortality risk.
Longevity Relevance Analysis
(4)
The paper investigates the associations of DNA methylation algorithms with cardiovascular disease and mortality risk in older adults. This research is relevant as it explores potential biomarkers of aging that could inform strategies for longevity and age-related health outcomes.
Jinming Xiong, Qiaoyue Guo, Xianghang Luo
· Frontiers of medicine
· Department of Endocrinology, Endocrinology Research Center, Xiangya Hospital of Central South University, Changsha, 410008, China.
· pubmed
Aging is typically associated with decreased musculoskeletal function, leading to reduced mobility and increased frailty. As a hallmark of aging, cellular senescence plays a crucial role in various age-related musculoskeletal diseases, including osteoporosis, osteoarthritis, inte...
Aging is typically associated with decreased musculoskeletal function, leading to reduced mobility and increased frailty. As a hallmark of aging, cellular senescence plays a crucial role in various age-related musculoskeletal diseases, including osteoporosis, osteoarthritis, intervertebral disc degeneration, and sarcopenia. The detrimental effects of senescence are primarily due to impaired regenerative capacity of stem cells and the pro-inflammatory environment created by accumulated senescent cells. The secreted senescence-associated secretory phenotype (SASP) can induce senescence in neighboring cells, further amplifying senescent signals. Although the removal of senescent cells and the suppression of SASP factors have shown promise in alleviating disease progression and restoring musculoskeletal health in mouse models, clinical trials have yet to demonstrate significant efficacy. This review summarizes the mechanisms of cellular senescence in age-related musculoskeletal diseases and discusses potential therapeutic strategies targeting cellular senescence.
Longevity Relevance Analysis
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The paper discusses the role of cellular senescence in age-related musculoskeletal diseases and potential therapeutic strategies to target this process. This research is relevant as it addresses a fundamental aspect of aging and explores interventions that could mitigate age-related decline in musculoskeletal health.
Jain, P., Akhter, A., Banerjee, A.
· neuroscience
· National Brain Research Centre
· biorxiv
Age-related decline underlies cognitive functions such as sensorimotor control, executive functioning, memory, and language production (LP), whereas language comprehension (LC) tends to remain intact or improve across healthy adult lifespan. Preservation of LC can have structural...
Age-related decline underlies cognitive functions such as sensorimotor control, executive functioning, memory, and language production (LP), whereas language comprehension (LC) tends to remain intact or improve across healthy adult lifespan. Preservation of LC can have structural and functional origins identifiable from key brain regions of the language network (LAN). To investigate this hypothesis, we analyzed the relationships among resting-state brain functional connectivity (rsFC) derived from functional magnetic resonance imaging (fMRI) signals, structural connectivity (SC) derived from diffusion MRI metrices, and behaviour (LC and LP) using a cross-sectional cohort of healthy adults (N = 652; aged 18-88). Six cognitive tasks assessing LC and LP were employed, with neuroimaging measures focused on region-specific connections within the LAN. Using generalized additive mixed models (GAMMs), complex brain-behaviour interactions were identified. Behavioral analyses revealed established age-related dichotomy, LC abilities in vocabulary and proverb comprehension improved and in syntactic and semantic comprehension remained stable, whereas LP tasks, e.g., verbal fluency, picture priming, and tip of tongue exhibited significant decline across the lifespan. SC exhibited decline in both intra- and inter-hemispheric fronto-temporal and frontal lobe connections, contrasted by preserved or enhanced temporal lobe connectivity, supporting a pattern of frontal vulnerability concomitant with temporal resilience. Age-related FC patterns demonstrated overall preservation, reflecting compensatory mechanisms to sustain functional integrity despite structural degradation. GAMM analyses revealed complex relationships between brain connectivity and language performance across age. Thus, integrating knowledge of brain structure, function, and language abilities, we identified the brain network mechanisms associated with dichotomous language behavior along lifespan.
Longevity Relevance Analysis
(4)
The paper claims that differential language aging trajectories are influenced by neuro-compensatory mechanisms in the brain. This research is relevant as it explores the underlying mechanisms of cognitive functions related to aging, specifically focusing on language abilities, which can contribute to understanding the aging process and potential interventions.
Chen, L., Li, H., Zhu, Y. ...
· scientific communication and education
· Third People\\\'s Hospital of Yunnan Province
· biorxiv
Objective The accumulation of DNA damage and mutations is a key contributor to aging. Recent studies have shown that disrupting the Beclin 1-BCL2 autophagy regulatory complex through gene editing can extend lifespan in mice. The precise application of gene editing technologies of...
Objective The accumulation of DNA damage and mutations is a key contributor to aging. Recent studies have shown that disrupting the Beclin 1-BCL2 autophagy regulatory complex through gene editing can extend lifespan in mice. The precise application of gene editing technologies offers a promising strategy for aging. This study conducted a bibliometric analysis to map the knowledge landscape of gene editing and aging. Methods We retrieved publications related to genome editing and aging from the Web of Science Core Collection, covering the period from 2015 to 2024. The data were analyzed using VOSviewer and R package Bibliometrix. These tools enabled us to identify the most productive researchers, journals, institutions, countries and visualized current trends, emerging research hotspots. Results A total of 982 publications on genome editing and aging were identified. The United States (n=285) and China (n=214) form a dual-core structure leading global output. Harvard University (n=116) emerged as the most prolific institution. Scientific Reports was the top-publishing journal, with 23 articles in 2024. ZHANG Y (n=12, citations=102, H-index=6) was identified as the most productive author. KIM Es 2017 publication in Nature Communications (TC=494, TC/year=54.9, NTC=9.33) has had a significant and ongoing impact. The analysis indicates that future directions will include CRISPR optimization and AI-assisted genomic analysis. Conclusion This study presents the first comprehensive bibliometric analysis and visualization of the knowledge structure in gene editing and aging research up to 2024. It offers researchers a detailed overview of current developments, trends, and emerging frontiers in this rapidly evolving domain.
Longevity Relevance Analysis
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The paper conducts a bibliometric analysis of gene editing research related to aging. It is relevant as it focuses on gene editing technologies that aim to address the root causes of aging, particularly through the lens of DNA damage and lifespan extension.
Vinicius, L., Migliano, A. B.
· physiology
· University of Zurich
· biorxiv
Olshansky and collaborators have recently proposed that the era of continuous extension of human lifespans has finally come to an end. By analysing thirty years of recent demographic data (1990-2020) from ten populations (the eight longest-lived nations, plus Hong Kong and the US...
Olshansky and collaborators have recently proposed that the era of continuous extension of human lifespans has finally come to an end. By analysing thirty years of recent demographic data (1990-2020) from ten populations (the eight longest-lived nations, plus Hong Kong and the USA), they rejected the claims made by Oeppen and Vaupel at the start of the century (and more recently by Vaupel and collaborators) that human longevity was still far from approaching an upper limit. However, on closer examination the results by Olshansky and colleagues seem to complement rather than directly challenge the radical life extension hypothesis. The reason is that the latter was based not on country-level demographic patterns but instead on a best-practice life expectancy trend resulting from the succession of annual world-leading populations. Here we present an update based on data from the last two decades that confirms Oeppen and Vaupels original insights and demonstrates that both female and male lifespans continue to linearly increase at a global scale. This remarkably long trend observed since 1840 remains at odds with our expectation that human lifespans must at some point hit a biologically imposed ceiling.
Longevity Relevance Analysis
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Human lifespans continue to linearly increase at a global scale despite claims of an upper limit. The paper is relevant as it addresses the ongoing trends in human longevity and challenges existing theories about biological limits to lifespan, contributing to the understanding of aging and longevity research.
Madhurima Das, Isha Behere, Ganesh Ingavle ...
· Biological research
· Symbiosis Centre for Stem Cell Research, Symbiosis International (Deemed University), Pune, 412115, India.
· pubmed
Aging affects the reparative potency of mesenchymal stem/stromal cells (MSCs) by diminishing their proliferation and differentiation capability; making them unsuitable for regenerative purposes. Earlier we showed that MSCs acquire the expression of CD45 as a consequence of aging,...
Aging affects the reparative potency of mesenchymal stem/stromal cells (MSCs) by diminishing their proliferation and differentiation capability; making them unsuitable for regenerative purposes. Earlier we showed that MSCs acquire the expression of CD45 as a consequence of aging, and this increased expression is associated with downregulated expression of osteogenic markers and upregulated expression of adipogenic and osteoclastogenic markers. However, whether CD45 is actively involved in the aging-mediated deregulated differentiation in the MSCs was not elucidated.
Longevity Relevance Analysis
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Inhibition of CD45-specific phosphatase activity can restore the differentiation potential of aged mesenchymal stromal cells. This research addresses a mechanism related to aging that affects stem cell functionality, which is crucial for regenerative medicine and longevity.
Yuwen Li, Xinrong Jin, Chunyu Yu ...
· Communications biology
· Zhejiang Key Laboratory of Medical Epigenetics, School of Basic Medical Sciences, The Third People's Hospital of Deqing, Department of Cardiology, Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University, Hangzhou, China.
· pubmed
Phase separation, a biophysical process that segregates subcellular environments into condensates, has been recognized for its role in transcriptional regulation. However, the extent of its influence on cellular senescence processes remains to be fully elucidated. We established ...
Phase separation, a biophysical process that segregates subcellular environments into condensates, has been recognized for its role in transcriptional regulation. However, the extent of its influence on cellular senescence processes remains to be fully elucidated. We established that MRG15 depletion leads to cellular senescence in human mesenchymal stem cells (hMSCs). MRG15 can form phase-separated liquid condensates via its intrinsically disordered region (IDR). IDR deletion and replacement assays revealed that MRG15 condensation is crucial to hMSC senescence. According to the epigenomic and transcriptomic analysis, MRG15 depletion impacts pathways integral to the cell cycle and the senescence process, as evidenced by the diminished binding and the modified expression of key genes, including p53, CDKN1A, LMNB1, CCNB1, NPM1, MYC, and HMGB2. Our findings establish a link between phase separation and senescence regulation and present a promising new therapeutic target for the alleviation of age-related diseases and the potential extension of lifespan.
Longevity Relevance Analysis
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MRG15 phase separation is crucial for regulating cellular senescence in human mesenchymal stem cells. The study addresses a mechanism related to cellular aging, linking phase separation to the senescence process, which is relevant for understanding and potentially mitigating age-related diseases.
Wei Liu, Yadan Xiao, Manting Zeng
· Scientific reports
· Department of Gastrointestinal Surgery, Xiangya Hospital, Central South University, Changsha, 410008, Hunan, China.
· pubmed
Increasing age is a risk factor of gastroesophageal reflux disease. This study aims to uncover the shared genetic architecture of gastroesophageal reflux disease (GERD) and age-related phenotypes. Based on publicly available GWAS statistics, this genome-wide pleiotropic associati...
Increasing age is a risk factor of gastroesophageal reflux disease. This study aims to uncover the shared genetic architecture of gastroesophageal reflux disease (GERD) and age-related phenotypes. Based on publicly available GWAS statistics, this genome-wide pleiotropic association research was performed with multiple genetic approaches sequentially to explore the pleiotropic associations from single-nucleotide polymorphism (SNP) and gene levels, to reveal the underlying shared genetic etiology between GERD and age-related phenotypes. This study featured shared genetic mechanisms between GERD and age-related phenotypes, including frailty index (FI), telomere length (TL), longevity, and parental lifespan (PL). Strong genetic association were observed. A set of pleiotropic loci and genes were identified by PLACO, FUMA, Bayesian colocalization and additional MAGMA analysis. Our research provided strong evidence of genetic correlation between GERD and several age-related phenotypes, especially frailty index (FI) and telomere length (TL), brought novel insight into the shared genetic architecture between GERD and aging.
Longevity Relevance Analysis
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The paper identifies shared genetic mechanisms between gastroesophageal reflux disease and age-related phenotypes. The study explores genetic correlations that may contribute to understanding the underlying factors of aging and longevity.
Virginia Gao, Julita Chlebowicz, Karlton Gaskin ...
· Nature communications
· Brain and Mind Research Institute, Appel Alzheimer's Disease Research Institute, Weill Cornell Medicine, New York, NY, 10021, USA.
· pubmed
Neurotransmitter release occurs through exocytosis of synaptic vesicles. α-Synuclein's function and dysfunction in Parkinson's disease and other synucleinopathies is thought to be tightly linked to synaptic vesicle binding. Age is the biggest risk factor for synucleinopathy, and ...
Neurotransmitter release occurs through exocytosis of synaptic vesicles. α-Synuclein's function and dysfunction in Parkinson's disease and other synucleinopathies is thought to be tightly linked to synaptic vesicle binding. Age is the biggest risk factor for synucleinopathy, and ~15% of synaptic vesicle proteins have been linked to central nervous system diseases. Yet, age- and disease-induced changes in synaptic vesicles remain unexplored. Via systematic analysis of synaptic vesicles at the ultrastructural, protein, and lipid levels, we reveal specific changes in synaptic vesicle populations, proteins, and lipids over age in wild-type mice and in α-synuclein knockout mice with and without expression of human α-synuclein. Strikingly, we find several previously undescribed synaptic changes in mice lacking α-synuclein, suggesting that loss of α-synuclein function contributes to synaptic dysfunction. These findings not only provide insights into synaptic vesicle biology and disease mechanisms in synucleinopathy, but also serve as a baseline for further mechanistic exploration of age- and disease-related alterations in synaptic vesicles.
Longevity Relevance Analysis
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The paper claims that loss of α-synuclein function contributes to synaptic dysfunction in aging and synucleinopathy. The research explores age-related changes in synaptic vesicles, which are crucial for understanding the mechanisms of aging and neurodegenerative diseases, thus addressing root causes rather than just symptoms.
Lena Guerrero-Navarro, Pablo Monfort-Lanzas, Vinzenz Krichbaumer ...
· Aging cell
· Institute for Biomedical Aging Research, Universität Innsbruck, Innsbruck, Austria.
· pubmed
Cells experience oxidative stress and widespread cellular damage during stress-induced premature senescence (SIPS). Senescent cells show an increase in lysosomal content, which may contribute to mitigating cellular damage by promoting autophagy. This study investigates the dynami...
Cells experience oxidative stress and widespread cellular damage during stress-induced premature senescence (SIPS). Senescent cells show an increase in lysosomal content, which may contribute to mitigating cellular damage by promoting autophagy. This study investigates the dynamics of lysosomal quality control in human dermal fibroblasts (HDF), specifically examining lysosomal signaling pathways during oxidative stress-induced SIPS. Our results reveal distinct signaling responses between the initial stress phase and the ensuing senescent phenotype. During the stress phase, treatment with tBHP, which undermines the antioxidant response, leads to elevated reactive oxygen species (ROS) and lysosomal damage. ROS accumulation activates AMP-activated protein kinase (AMPK) and inhibits Akt, which correlates with the suppression of mammalian target of rapamycin (mTOR). Inactivation of mTOR during this phase aligns with the activation of transcription factor EB (TFEB), a key regulator of autophagy and lysosomal biogenesis. TFEB knockdown under stress increased apoptosis, highlighting the protective role of TFEB in the stress response. As cells transition to senescence, TFEB activity, required for the autophagic damage repair, becomes less critical. The decrease in ROS levels leads to the normalization of AMPK and Akt signaling, accompanied by the reactivation of mTOR. This reactivation of mTOR, which is critical for establishing the senescent state, is observed alongside the inactivation of TFEB. Consequently, as damage decreases, TFEB activity decreases. Our results suggest a dynamic interplay between TFEB and mTOR, highlighting a critical role of TFEB in ensuring cellular survival during SIPS induction but becoming dispensable once senescence is established.
Longevity Relevance Analysis
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The paper claims that TFEB plays a protective role during oxidative stress-induced premature senescence in human dermal fibroblasts. This research is relevant as it explores the mechanisms underlying cellular senescence and the role of autophagy, which are critical factors in the aging process and longevity.
Miso Jeong, Hyangju Lee, Tae-Hyun Ko ...
· Rejuvenation research
· Research Institute of Advanced Regenerative Medicine, MEDIPOST Co., Ltd., Seongnam, South Korea.
· pubmed
Aging is associated with a gradual decline in cellular function, largely driven by oxidative stress, which leads to cellular senescence. These processes contribute to tissue degeneration and age-related dysfunction. Human dermal fibroblasts (HDFs), critical for maintaining skin s...
Aging is associated with a gradual decline in cellular function, largely driven by oxidative stress, which leads to cellular senescence. These processes contribute to tissue degeneration and age-related dysfunction. Human dermal fibroblasts (HDFs), critical for maintaining skin structure, are highly vulnerable to oxidative damage, making them key contributors to skin aging. Umbilical cord blood plasma (UCBP), rich in growth factors and regenerative molecules, has shown potential in preventing cellular senescence and addressing key mechanisms of tissue aging. Based on findings from heterochronic parabiosis experiments that demonstrated the rejuvenating effect of young blood, we investigated the effects of UCBP on hydrogen peroxide (H
Longevity Relevance Analysis
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Umbilical cord blood plasma enhances the repair of human dermal fibroblasts and suppresses cellular senescence under oxidative stress. This research addresses mechanisms of cellular aging and potential interventions to mitigate age-related decline, aligning with the goals of longevity research.
Chao Zhang, Nathalie Saurat, Daniela Cornacchia ...
· Aging cell
· Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, USA.
· pubmed
The differentiation of human pluripotent stem cells (hPSCs) provides access to a wide range of cell types and tissues. However, hPSC-derived lineages typically represent a fetal stage of development, and methods to expedite the transition to an aged identity to improve modeling o...
The differentiation of human pluripotent stem cells (hPSCs) provides access to a wide range of cell types and tissues. However, hPSC-derived lineages typically represent a fetal stage of development, and methods to expedite the transition to an aged identity to improve modeling of late-onset disease are limited. In this study, we introduce RNAge, a transcriptome-based computational platform designed to enable the evaluation of an induced aging or a rejuvenated state. We validated this approach across independent datasets spanning different tissues and species, and show that it can be used to evaluate the effectiveness of existing age-retaining or age-modulating interventions. We also used RNAge to perform an in silico compound screen using the LINCS L1000 dataset. This approach led to the identification and experimental confirmation of several novel compounds capable of inducing aging or rejuvenation in primary fibroblasts or hPSC-derived neurons. Additionally, we observed that applying this novel induced aging strategy to an hPSC model of Alzheimer's disease (AD) accelerated neurodegeneration in a genotype-specific manner. Our study offers a robust method for quantifying age-related manipulations and unveils compounds that significantly broaden the toolkit for age-modifying strategies in hPSC-derived lineages.
Longevity Relevance Analysis
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The study identifies compounds that can induce aging or rejuvenation in human pluripotent stem cells, contributing to the understanding of age-modulating strategies. This research is relevant as it addresses mechanisms of aging and explores potential interventions that could impact age-related diseases.
Zhou, D., Zhou, Y., Sun, Z. ...
· neuroscience
· School of Public Health, the Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China
· biorxiv
The China Brain Multi-omics Atlas Project (CBMAP) aims to generate a comprehensive molecular reference map of over 1,000 human brains (Phase I), spanning a broad age range and multiple regions in China, to address the underrepresentation of East Asian populations in brain researc...
The China Brain Multi-omics Atlas Project (CBMAP) aims to generate a comprehensive molecular reference map of over 1,000 human brains (Phase I), spanning a broad age range and multiple regions in China, to address the underrepresentation of East Asian populations in brain research. By integrating genome, epigenome, transcriptome, proteome (including multiple post-translational modifications), and metabolome data, CBMAP is set to provide a rich and invaluable resource for investigating the molecular underpinnings of aging-related brain phenotypes and neuropsychiatric disorders. Leveraging high-throughput omics data and advanced technologies, such as spatial transcriptomics, proteomics, and single-nucleus 3D chromatin structure analysis, this atlas will serve as a crucial resource for the brain science community, illuminating disease mechanisms and enhancing the utility of data from genome-wide association studies (GWAS). CBMAP is also poised to accelerate drug discovery and precision medicine for brain disorders.
Longevity Relevance Analysis
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The CBMAP aims to create a comprehensive molecular reference map of human brains to investigate the molecular underpinnings of aging-related brain phenotypes. This project addresses the root causes of aging by integrating multi-omics data to enhance understanding of neuropsychiatric disorders and aging mechanisms.
Sujin Kim, Bonsang Gu, Chan-Young So ...
· Cellular & molecular biology letters
· Department of Pharmacology, Inha University College of Medicine, 100, Inha-Ro, Michuhol-Gu, Incheon, 22212, Republic of Korea.
· pubmed
Sarcopenia, characterized by a progressive loss of skeletal muscle mass and function, is associated with the accumulation of senescent muscle stem cells, which impair muscle regeneration and contributes to the decline in muscle health. Cdkn1a, which encodes p21, is a well-known m...
Sarcopenia, characterized by a progressive loss of skeletal muscle mass and function, is associated with the accumulation of senescent muscle stem cells, which impair muscle regeneration and contributes to the decline in muscle health. Cdkn1a, which encodes p21, is a well-known marker of cellular senescence. However, it remains unclear whether p21 inhibition eliminates senescent myoblasts and restores the differentiation capacity.
Longevity Relevance Analysis
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Silencing Cdkn1a enhances myoblast differentiation by selectively inducing apoptosis in senescent cells. This research addresses the accumulation of senescent cells, which is a root cause of sarcopenia and muscle degeneration associated with aging, thereby contributing to the understanding of mechanisms that could potentially restore muscle health in the context of longevity.
Patton, A., Davidsen, J.
· neuroscience
· University of Calgary
· biorxiv
The aging process profoundly impacts the human brain, leading to notable changes in cognitive abilities. Although the brains structural and functional alterations with age are individually well documented, how differences in cognitive abilities emerge from variations in the under...
The aging process profoundly impacts the human brain, leading to notable changes in cognitive abilities. Although the brains structural and functional alterations with age are individually well documented, how differences in cognitive abilities emerge from variations in the underlying spatio-temporal patterns of regional brain activity is largely unknown. Patterns of increased synchronization between brain regions are taken as enhanced cognitive integration, while decreased synchronization is indicative of cognitive segregation. The ability to dynamically switch between different levels of integration and segregation across different cognitive systems is believed to be crucial for overall cognitive performance. Building on a recently proposed cognitively informed, synchronization-based framework, we study here age-related variations in dynamical flexibility between segregation and integration, as captured by changes in the variable patterns of partial synchronization or chimera states. Leveraging personalized brain network models based on large-scale, multisite datasets of cross-sectional healthy cohorts, we systematically show how regional brain stimulation produces distinct patterns of synchronization. We find that chimera states play a crucial role in regulating the balance between cognitive integration and segregation as the brain ages, providing new insights into the mechanisms underlying cognitive decline and preservation in aging. Whereas the emergent synchronization behavior of brain regions belonging to the same cognitive system often show the same aging trends, different cognitive systems can demonstrate distinct trends. This supports the idea that aging affects cognitive systems differently and that understanding this variability is essential for a more comprehensive view of neuro-cognitive aging. At the same time, dynamical flexibility increases in the oldest age groups across most cognitive systems. This may reflect compensatory mechanisms to counteract age-related cognitive declines and points towards a phenomenon of dedifferentiation. Yet, the multiplicity of behaviors highlights that whereas dedifferentiation emerges in certain cognitive systems, differentiation can also occur in others. This illustrates that these processes, though seemingly oppositional, can coexist and unfold in parallel across different cognitive systems.
Longevity Relevance Analysis
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The paper claims that age-related variations in brain network synchronization patterns influence cognitive integration and segregation. This research is relevant as it explores the underlying mechanisms of cognitive decline and preservation in aging, contributing to a deeper understanding of neuro-cognitive aging processes.
Xue-Feng Bai, Jun-Chi Ma, Cheng Zhang ...
· Journal of the American Chemical Society
· Key Laboratory of Biomedical Polymers of Ministry of Education, Department of Chemistry, Wuhan University, Wuhan 430072, P. R. China.
· pubmed
Enormous resources have been devoted to address the suboptimal response of tumor patients to immunotherapy. However, a crucial yet often overlooked factor in these effects is the strong correlation between the occurrence and development of tumors and the immune dysfunction associ...
Enormous resources have been devoted to address the suboptimal response of tumor patients to immunotherapy. However, a crucial yet often overlooked factor in these effects is the strong correlation between the occurrence and development of tumors and the immune dysfunction associated with aging. Our study aims to rejuvenate aging T cells within tumor-draining lymph nodes (TdLNs) by using targeted delivery of rapamycin, a macrolide capable of mitigating aging-related decline in immune function, thereby enhancing the antitumor efficacy of immunotherapy in aged mice. The targeted delivery system relies on a bioorthogonal reaction that harnesses the click chemistry between the azide (N
Longevity Relevance Analysis
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The paper claims that targeted delivery of rapamycin can rejuvenate aging T cells and enhance the efficacy of tumor immunotherapy in aged mice. This research addresses the immune dysfunction associated with aging, which is a root cause of age-related decline in immune function, making it relevant to longevity research.
Gonzalo Soto-Heredero, Enrique Gabandé-Rodríguez, Elisa Carrasco ...
· Nature aging
· Departamento de Biología Molecular, Facultad de Ciencias, Centro de Biología Molecular 'Severo Ochoa', Universidad Autónoma de Madrid, Madrid, Spain.
· pubmed
Recent studies using single-cell RNA sequencing technology have uncovered several subpopulations of CD4
Recent studies using single-cell RNA sequencing technology have uncovered several subpopulations of CD4
Longevity Relevance Analysis
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The paper claims that KLRG1 identifies a subset of regulatory T cells with mitochondrial alterations that increase with aging. This research is relevant as it explores the cellular mechanisms associated with aging, potentially addressing the root causes of age-related decline in immune function.
Yu Zheng Li, Lisen Gao, Xue-Lian Sun ...
· National science review
· State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
· pubmed
Darwinian selection, operating within the cellular ecosystem of multicellular organisms, drives a pervasive surveillance mechanism of cell-cell competition that shapes tissue architecture and function. While cell competition eliminates suboptimal cells to ensure tissue integrity ...
Darwinian selection, operating within the cellular ecosystem of multicellular organisms, drives a pervasive surveillance mechanism of cell-cell competition that shapes tissue architecture and function. While cell competition eliminates suboptimal cells to ensure tissue integrity across various tissues, neuronal competition specifically sculpts neural networks to establish precise circuits for sensory, motor and cognitive functions. However, our understanding of cell competition across diverse neural cell types in both developmental and pathological contexts remains limited. Here, we review recent advances on the phenomenon, and mechanisms and potential functions of neural cell competition (NCC), ranging from neural progenitors, neurons, astrocytes and oligodendrocytes to microglia. Physiological NCC governs cellular survival, proliferation, arborization, organization, function and territorial colonization, whereas dysregulated NCC may cause neurodevelopmental disorders, accelerate aging, exacerbate neurodegenerative diseases and drive brain tumor progression. Future work that leverages cell competition mechanisms may help to improve cognition and curb diseases.
Longevity Relevance Analysis
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Neural cell competition plays a crucial role in shaping neural networks and may influence neurodevelopmental disorders and neurodegenerative diseases. The paper discusses mechanisms that could potentially address root causes of aging-related cognitive decline and neurodegeneration, making it relevant to longevity research.
Bowei Li, Zhongyun Xie, Mengmeng Wang ...
· Advanced science (Weinheim, Baden-Wurttemberg, Germany)
· Brain Cognition and Brain Disease Institute (BCBDI), Shenzhen Institutes of Advanced Technology (SIAT), Chinese Academy of Sciences, Shenzhen, Guangdong, 518055, China.
· pubmed
The brain plays a central role in aging and longevity in diverse model organisms. Morphological and functional alteration in the aging brain elicits age-associated neuronal dysfunctions. However, the primary mechanism deteriorating the brain functions to regulate the aging proces...
The brain plays a central role in aging and longevity in diverse model organisms. Morphological and functional alteration in the aging brain elicits age-associated neuronal dysfunctions. However, the primary mechanism deteriorating the brain functions to regulate the aging process remains incompletely understood. Here, it is shown that neuronal CCAAT/enhancer binding protein β (C/EBPβ) escalation during aging dictates the frailty and lifespan via inactivating nicotinamide phosphoribosyltransferase (NAMPT). Upregulated C/EBPβ drives neuronal senescence and neuronal loss, associated with NAMPT fragmentation by active asparagine endopeptidase (AEP), leading to nicotinamide adenine dinucleotide (NAD
Longevity Relevance Analysis
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The paper claims that neuronal C/EBPβ escalation during aging shortens lifespan by inactivating NAMPT. This research addresses a potential mechanism underlying aging and longevity, focusing on neuronal function and its impact on lifespan, which is central to the study of aging.
Yanling Fan, Yandong Zheng, Yiyuan Zhang ...
· Nature cardiovascular research
· China National Center for Bioinformation, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China.
· pubmed
Elucidating the regulatory mechanisms of human cardiac aging remains a great challenge. Here, using human heart tissues from 74 individuals ranging from young (≤35 years) to old (≥65 years), we provide an overview of the histological, cellular and molecular alterations underpinni...
Elucidating the regulatory mechanisms of human cardiac aging remains a great challenge. Here, using human heart tissues from 74 individuals ranging from young (≤35 years) to old (≥65 years), we provide an overview of the histological, cellular and molecular alterations underpinning the aging of human hearts. We decoded aging-related gene expression changes at single-cell resolution and identified increased inflammation as the key event, driven by upregulation of ARID5A, an RNA-binding protein. ARID5A epi-transcriptionally regulated Mitochondrial Antiviral Signaling Protein (MAVS) mRNA stability, leading to NF-κB and TBK1 activation, amplifying aging and inflammation phenotypes. The application of gene therapy using lentiviral vectors encoding shRNA targeting ARID5A into the myocardium not only mitigated the inflammatory and aging phenotypes but also bolstered cardiac function in aged mice. Altogether, our study provides a valuable resource and advances our understanding of cardiac aging mechanisms by deciphering the ARID5A-MAVS axis in post-transcriptional regulation.
Longevity Relevance Analysis
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The paper claims that ARID5A regulates MAVS mRNA stability, influencing cardiac aging and inflammation. This research is relevant as it addresses the underlying mechanisms of cardiac aging, potentially contributing to our understanding of aging processes and interventions that could mitigate age-related decline in cardiac function.
Monty Montano
· Aging cell
· Harvard Medical School, Boston, Massachusetts, USA.
· pubmed
Aging is typically framed by disease, not resilience. This Perspective highlights immune resilience (IR) as a core determinant of healthy aging, based on new findings linking TCF7-driven immune profiles to extended healthspan and lifespan. IR buffers against immunosenescence, inf...
Aging is typically framed by disease, not resilience. This Perspective highlights immune resilience (IR) as a core determinant of healthy aging, based on new findings linking TCF7-driven immune profiles to extended healthspan and lifespan. IR buffers against immunosenescence, inflammaging, and senescent cell phenotypes, with benefits most pronounced before age 70. By reframing aging around salutogenesis rather than pathogenesis, this work shifts the focus toward resilience mechanisms and composite traits preserving health.
Longevity Relevance Analysis
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Immune resilience is proposed as a key factor in promoting healthy aging and extending healthspan and lifespan. This paper addresses the underlying mechanisms of aging by focusing on immune resilience rather than merely treating age-related diseases, aligning with the goal of understanding and potentially mitigating the root causes of aging.
Yun Zou, Jing Huang, Xiaoli Tang ...
· Clinical epigenetics
· Department of Endocrinology and Metabolism, First Affiliated Hospital of Nanchang University, No 17 Yongwaizheng St., Nanchang, 330006, Jiangxi Province, People's Republic of China.
· pubmed
Although DNA methylation age estimators (DNAmAges) are reliable tools for predicting aging, their effectiveness in predicting mortality risk has not been fully validated. This study compared the predictive utility of five different DNAmAges (HorvathAge, HannumAge, PhenoAgeAge, Gr...
Although DNA methylation age estimators (DNAmAges) are reliable tools for predicting aging, their effectiveness in predicting mortality risk has not been fully validated. This study compared the predictive utility of five different DNAmAges (HorvathAge, HannumAge, PhenoAgeAge, GrimAge and GrimAge2) for all-cause and cause-specific mortality among adults aged ≥ 50 years.
Longevity Relevance Analysis
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This study evaluates the predictive utility of various DNA methylation age estimators for mortality risk in older adults. The paper is relevant as it investigates biomarkers of aging that could potentially inform interventions aimed at extending lifespan and improving health in aging populations.
Huseyin Kilili, Benjamin Padilla-Morales, Atahualpa Castillo-Morales ...
· Scientific reports
· Milner Centre for Evolution, Department of Life Sciences, University of Bath, Bath, BA2 7AY, UK.
· pubmed
Mammals exhibit an unusual variation in their maximum lifespan potential, measured as the longest recorded longevity of any individual in a species. Evidence suggests that lifespan increases follow expansion in brain size relative to body mass. Here, we found significant gene fam...
Mammals exhibit an unusual variation in their maximum lifespan potential, measured as the longest recorded longevity of any individual in a species. Evidence suggests that lifespan increases follow expansion in brain size relative to body mass. Here, we found significant gene family size expansions associated with maximum lifespan potential and relative brain size but not in gestation time, age of sexual maturity, and body mass in 46 mammalian species. Extended lifespan is associated with expanding gene families enriched in immune system functions. Our results suggest an association between gene duplication in immune-related gene families and the evolution of longer lifespans in mammals. These findings explore the genomic features linked with the evolution of lifespan in mammals and its association with life story and morphological traits.
Longevity Relevance Analysis
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The paper claims that gene family size expansions related to immune system functions are associated with maximum lifespan and brain size in mammals. This research is relevant as it explores genomic features linked to the evolution of lifespan, addressing potential root causes of aging through the lens of immune system evolution.
Jiahua Qu, Zhichao Lu, Yongbo Cheng ...
· Hippocampus
· Research Center of Clinical Medicine, Co-Innovation Department of Neurosurgery, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
· pubmed
Aging-related cognitive decline is closely linked to the reduced function of neural progenitor/stem cells (NPSCs), which can be influenced by the neural microenvironment, particularly astrocytes. The aim of this study was to explore how astrocytes affect NPSCs and cognitive funct...
Aging-related cognitive decline is closely linked to the reduced function of neural progenitor/stem cells (NPSCs), which can be influenced by the neural microenvironment, particularly astrocytes. The aim of this study was to explore how astrocytes affect NPSCs and cognitive function during aging.
Longevity Relevance Analysis
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The paper claims that miR-484 in hippocampal astrocytes regulates neural progenitor/stem cell proliferation and differentiation into neurons. This research addresses the mechanisms underlying cognitive decline in aging, which is directly related to the function of neural progenitor/stem cells and their potential role in longevity and age-related cognitive health.
Warren, P. K., Miller, G., Kandlikar, G. S. ...
· evolutionary biology
· University of Missouri
· biorxiv
Dietary environments can influence host-microbe evolution by shaping adaptive fitness responses. However, host-microbe dynamics on evolutionary time scales remain under-characterized. We studied Drosophila melanogaster experimentally evolved under three nutrient regimes: constant...
Dietary environments can influence host-microbe evolution by shaping adaptive fitness responses. However, host-microbe dynamics on evolutionary time scales remain under-characterized. We studied Drosophila melanogaster experimentally evolved under three nutrient regimes: constant high (CH), deteriorating (DA), and fluctuating (FA) availability, alongside unselected controls (C). DA and FA increased longevity relative to CH, with DA enhancing late-life survival, though all selected groups showed higher mortality than C, suggesting fitness costs of dietary adaptation. Sex-specific effects emerged, with FA favoring early-life female survival and DA supporting late-life female longevity. Microbial richness and composition shifted with selection and time. While Firmicutes and Proteobacteria dominated generally, selection regimes showed higher Firmicute and lower Proteobacteria abundances compared to C, correlating with dysbiotic microbiomes starting early in adulthood. DA flies maintained a relatively stable microbial diversity over time, potentially supporting longevity. In contrast, CH and FA both exhibited low microbial diversity that destabilized with age. Indicator species analysis revealed treatment- and age-specific genera, with CH and FA showing greater dysbiosis, marked by potentially pathogenic taxa such as Leptotrichia and Mobiluncus. Our findings highlight the importance of early life stages in maintaining microbiome stability and host fitness, suggesting dietary stress drives distinct microbiota patterns and survival strategies.
Longevity Relevance Analysis
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Dietary environments influence host-microbe dynamics and longevity in Drosophila melanogaster. The study explores how nutritional stress adaptation affects microbiome stability and life history dynamics, which are critical factors in understanding the mechanisms of aging and longevity.
Fahimeh Salehi, Gholamreza Kavoosi, Paul J Jacobs ...
· GeroScience
· Institute of Biochemistry and Biophysics, Department of Biochemistry, University of Tehran, Tehran, Iran.
· pubmed
Longevity is influenced by various factors, including fatty acid composition and free radical stress, which relate to the membrane pacemaker and rate of living hypotheses. While these aspects are well-documented in some long-lived species, they remain largely unexplored in tree s...
Longevity is influenced by various factors, including fatty acid composition and free radical stress, which relate to the membrane pacemaker and rate of living hypotheses. While these aspects are well-documented in some long-lived species, they remain largely unexplored in tree squirrels. This study aimed to compare oxidative stress, antioxidant activity, nitrosative stress, and lipid composition between the long-lived Persian squirrel (Sciurus anomalus) and the short-lived Wistar rat across age cohorts (younger and older). Tissue homogenates from skin, liver, skeletal muscle, spleen, lung, and kidney were analysed for lipid composition (monounsaturated fatty acids (MUFA), polyunsaturated fatty acids (PUFA), arachidonic to linoleic acid ratio, peroxidation index, and unsaturation index. Oxidative, nitrosative, and antioxidant markers were assessed, including NADPH oxidase, superoxide dismutase, catalase, glutathione peroxidase, glutathione S-transferase (GST), nitric oxide synthase, superoxide, hydrogen peroxide, nitric oxide, malondialdehyde, 4-hydroxynonenal, and total antioxidant capacity (TAC). Squirrels demonstrated higher GST activity, lower free radical stress, lower PUFA, and higher MUFA compared to rats. Antioxidant activities, except for TAC were negatively correlated with longevity. Older squirrels exhibited similar oxidative, nitrosative, and antioxidant profiles to younger squirrels, whereas younger rats displayed highly susceptible fatty acids, similar to older rats. The Persian squirrel's longevity appears closely linked to fatty acid composition and free radical resistance, likely due to increased GST activity. We propose GST's multifunctional role in reducing inflammation, enhancing immune response, providing disease resistance, and antioxidant activity contributes significantly to the longevity of the Persian squirrel.
Longevity Relevance Analysis
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The paper claims that the longevity of the Persian squirrel is linked to its fatty acid composition and resistance to free radical stress. This study explores biological mechanisms related to aging and longevity, focusing on oxidative stress and lipid composition, which are critical factors in understanding the root causes of aging.
Haoxi Chai, Xingyu Huang, Guangzhou Xiong ...
· Nature methods
· Life Sciences Institute and The Second Affiliated Hospital, Zhejiang University, Hangzhou, China.
· pubmed
Exploring the genomic basis of transcriptional programs has been a long-standing research focus. Here we report a single-cell method, ChAIR, to map chromatin accessibility, chromatin interactions and RNA expression simultaneously. After validating in cultured cells, we applied Ch...
Exploring the genomic basis of transcriptional programs has been a long-standing research focus. Here we report a single-cell method, ChAIR, to map chromatin accessibility, chromatin interactions and RNA expression simultaneously. After validating in cultured cells, we applied ChAIR to whole mouse brains and delineated the concerted dynamics of epigenome, three-dimensional (3D) genome and transcriptome during maturation and aging. In particular, gene-centric chromatin interactions and open chromatin states provided 3D epigenomic mechanism underlying cell-type-specific transcription and revealed spatially resolved specificity. Importantly, the composition of short-range and ultralong chromatin contacts in individual cells is remarkably correlated with transcriptional activity, open chromatin state and genome folding density. This genomic property, along with associated cellular properties, differs in neurons and non-neuronal cells across different anatomic regions throughout the lifespan, implying divergent nuclear mechano-genomic mechanisms at play in brain cells. Our results demonstrate ChAIR's robustness in revealing single-cell 3D epigenomic states of cell-type-specific transcription in complex tissues.
Longevity Relevance Analysis
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The paper presents a novel method to map chromatin accessibility and transcriptional dynamics in mouse brains across the lifespan. This research is relevant as it explores the underlying genomic mechanisms of aging at a cellular level, which could contribute to understanding the root causes of aging and potential interventions.
Arends, D., Ashbrook, D. G., Roy, S. ...
· genetics
· University of Tennessee Health Science Center
· biorxiv
The dynamics of lifespan are shaped by DNA variants that exert effects at different ages. We have mapped genetic loci that modulate age-specific mortality using a new actuarial method. We started with 6,438 pubescent mice and ended with a survivorship of 559 mice that lived to at...
The dynamics of lifespan are shaped by DNA variants that exert effects at different ages. We have mapped genetic loci that modulate age-specific mortality using a new actuarial method. We started with 6,438 pubescent mice and ended with a survivorship of 559 mice that lived to at least 1100 days of age. Twenty-nine Vita loci dynamically modulate lifespan and have strong age-delimited effects after correction for multiple tests. Fourteen loci have relatively steady but genotype-dependent effects on mortality from pubescence to old age and are candidate aging rate modulators. Other loci act most forcefully over shorter periods of life, and the polarities of their genetic effects often invert with age and differ by sex. We detect 41 epistatic interactions among these Vita loci, all exclusive to males or females, and with strong signatures of sexual reciprocity. A distinct set of 19 Soma loci shape the negative correlation between larger body size in young adults with their subsequent life expectancies. These loci are direct evidence that antagonistic pleiotropy modulates mortality early in life. Another set of 11 Soma loci shape the positive correlation between heavier body weight at older ages and longer life expectancies. We provide exemplars of how to move from maps to mechanisms for two tractable loci. Our findings provide a solid empirical bridge between evolutionary theories on aging and their molecular causes. The 59 loci are keys to understand the impact of interventions on healthy lifespan in mice and humans.
Longevity Relevance Analysis
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The paper identifies genetic loci that modulate lifespan and their dynamic effects across different ages and sexes. This research is relevant as it explores the genetic underpinnings of aging and lifespan extension, contributing to the understanding of the biological mechanisms that influence longevity.
Muhammad Arif, Andrea Lehoczki, György Haskó ...
· GeroScience
· Laboratory of Cardiovascular Physiology and Tissue Injury, National Institute On Alcohol Abuse and Alcoholism, National Institutes of Health, Bethesda, MD, USA. [email protected].
· pubmed
Aging is a universal biological process that impacts all tissues, leading to functional decline and increased susceptibility to age-related diseases, particularly cardiometabolic disorders. While aging is characterized by hallmarks such as mitochondrial dysfunction, chronic infla...
Aging is a universal biological process that impacts all tissues, leading to functional decline and increased susceptibility to age-related diseases, particularly cardiometabolic disorders. While aging is characterized by hallmarks such as mitochondrial dysfunction, chronic inflammation, and dysregulated metabolism, the molecular mechanisms driving these processes remain incompletely understood, particularly in a tissue-specific context. To address this gap, we conducted a comprehensive transcriptomic analysis across 40 human tissues using data from the Genotype-Tissue Expression (GTEx) project, comparing individuals younger than 40 years with those older than 65 years. We identified over 17,000 differentially expressed genes (DEGs) across tissues, with distinct patterns of up- and down-regulation. Enrichment analyses revealed that up-regulated DEGs were associated with inflammation, immune responses, and apoptosis, while down-regulated DEGs were linked to mitochondrial function, oxidative phosphorylation, and metabolic processes. Using gene co-expression network (GCN) analyses, we identified 1,099 genes as dysregulated nodes (DNs) shared across tissues, reflecting global aging-associated transcriptional shifts. Integrating machine learning approaches, we pinpointed key aging biomarkers, including GDF15 and EDA2R, which demonstrated strong predictive power for aging and were particularly relevant in cardiometabolic tissues such as the heart, liver, skeletal muscle, and adipose tissue. These genes were also validated in plasma proteomics studies and exhibited significant correlations with clinical cardiometabolic health indicators. This study provides a multi-tissue, integrative perspective on aging, uncovering both systemic and tissue-specific molecular signatures. Our findings advance understanding of the molecular underpinnings of aging and identify novel biomarkers that may serve as therapeutic targets for promoting healthy aging and mitigating age-related diseases.
Longevity Relevance Analysis
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The study identifies key aging biomarkers and dysregulated genes associated with aging across multiple tissues. This research is relevant as it addresses the molecular mechanisms of aging and identifies potential therapeutic targets for promoting healthy aging and mitigating age-related diseases.
Kowald, A., Kirkwood, T. B. L.
· biochemistry
· University of Rostock
· biorxiv
Human life expectancy has increased dramatically over the past two centuries, marking a significant public health achievement. While some projections predict a future where median lifespans reach 100 years, others contend that further longevity will depend on breakthroughs target...
Human life expectancy has increased dramatically over the past two centuries, marking a significant public health achievement. While some projections predict a future where median lifespans reach 100 years, others contend that further longevity will depend on breakthroughs targeting the biological processes of aging. Recent studies in mice have demonstrated that telomerase activation, achieved via gene therapy and transgenic approaches, can extend both median and maximum lifespans substantially without an accompanying increase in cancer risk. We analysed survival data from three such studies using the Gompertz mortality model and show that these interventions reduce the slope parameter, indicative of a slower aging rate, rather than merely lowering baseline mortality. This observation challenges traditional models that assume independent, additive damage accumulation, suggesting instead that aging is driven by a limited number of interdependent processes with significant cross-talk. Mathematical modelling indicates that only three to five processes with substantial cross-talk may account for the observed deceleration. Extrapolation using Swedish survivorship data further implies that a reduction in the aging rate, similar to that seen in mice, could elevate the median human lifespan from 85 to over 100 years. These findings provide a compelling framework for developing targeted anti-aging interventions and a new perspective on the modifiability of the aging process.
Longevity Relevance Analysis
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The paper claims that aging is driven by a limited number of interdependent processes, suggesting that targeting these could significantly extend human lifespan. This research is relevant as it addresses the root causes of aging and proposes a framework for developing interventions aimed at lifespan extension.
Nishi, K., Sakamaki, T., Nagasaka, A. ...
· developmental biology
· Kobe University
· biorxiv
Myeloid-biased hematopoiesis is a well-known age-related alteration. Several possibilities, including myeloid-biased hematopoietic stem cell (HSC) clones, may explain this. However, the precise mechanisms remain controversial. Utilizing the Hoxb5 reporter system to prospectively ...
Myeloid-biased hematopoiesis is a well-known age-related alteration. Several possibilities, including myeloid-biased hematopoietic stem cell (HSC) clones, may explain this. However, the precise mechanisms remain controversial. Utilizing the Hoxb5 reporter system to prospectively isolate long-term HSCs (LT-HSCs) and short-term HSCs (ST-HSCs), we found that young and aged LT-HSCs co-transplanted into the same recipients demonstrated nearly equivalent myeloid lineage output, contrary to the theory of myeloid-biased HSC clones. Transcriptomics indicated no significant myeloid gene enrichment in aged LT-HSCs compared to their young counterparts. Instead, transplanting reconstituted young HSCs with the ratio of LT/ST-HSCs seen in aged mice can significantly skew the lineage output to myeloid cells. In addition, while the niche environment in the bone marrow minimally affects myeloid-biased hematopoiesis, aged thymi and spleens substantially hinder lymphoid hematopoiesis, resulting in further myeloid-domination. Thus, we demonstrate that myeloid-biased hematopoiesis in aged organisms originates due to alteration of the ratio between LT-HSCs and ST-HSCs rather than in heterogeneous HSC clones with various cell fates.
Longevity Relevance Analysis
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The paper claims that myeloid-biased hematopoiesis in aged organisms is primarily due to the alteration of the ratio between long-term and short-term hematopoietic stem cells rather than the presence of biased HSC clones. This research is relevant as it addresses the underlying mechanisms of age-related changes in hematopoiesis, which could contribute to understanding and potentially mitigating aspects of aging.
Yingying Chen, Yaning Sun, Yinyin Chen ...
· Longevity
· Department of Epidemiology and Biostatistics, School of Public Health, Anhui Medical University, 81 Meishan Road, Hefei, Anhui, 230032, China.
· pubmed
The role of dietary patterns in overall health and longevity among the elderly has not been comprehensively evaluated. We investigated the associations between multiple dietary indices and successful aging, longevity, and extreme longevity among older individuals, aiming to explo...
The role of dietary patterns in overall health and longevity among the elderly has not been comprehensively evaluated. We investigated the associations between multiple dietary indices and successful aging, longevity, and extreme longevity among older individuals, aiming to explore appropriate dietary patterns for the older Chinese population.
Longevity Relevance Analysis
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The paper claims that specific dietary patterns are associated with successful aging and longevity in older Chinese adults. This research is relevant as it explores dietary influences on longevity, addressing potential root causes of aging rather than merely treating age-related diseases.
Guangrui Yang, Xihao Du, Xuanwei Jiang ...
· GeroScience
· Department of Epidemiology and Biostatistics, School of Public Health, Shanghai Jiao Tong University School of Medicine, 415 East No. 1 Building, 227 South Chongqing Rd, Shanghai, 200025, China.
· pubmed
Biological age (BA), compared to chronological age, offers a more accurate reflection of aging status. In this prospective UK Biobank study, BA acceleration was measured using the Klemera-Doubal method BA (KDM-BA) and Phenotypic age (PhenoAge). Cox models estimated associations o...
Biological age (BA), compared to chronological age, offers a more accurate reflection of aging status. In this prospective UK Biobank study, BA acceleration was measured using the Klemera-Doubal method BA (KDM-BA) and Phenotypic age (PhenoAge). Cox models estimated associations of BA acceleration with incident T2D (n = 271,885) and CAD (n = 270,054). Both additive and multiplicative interactions between BA acceleration and polygenic risk score (PRS) were examined. Predictive performance was assessed by adding BA, PRS, and their interactions to traditional risk models. BA acceleration was positively associated with incident T2D (HR
Longevity Relevance Analysis
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Biological age acceleration is associated with an increased risk of type 2 diabetes and coronary artery disease. This paper is relevant as it explores biological age as a potential underlying factor in age-related diseases, contributing to the understanding of aging mechanisms.
Erina Sugita Nishimura, Akihito Hishikawa, Ran Nakamichi ...
· Nature communications
· Division of Nephrology, Endocrinology and Metabolism, Department of Internal Medicine, Keio University School of Medicine, Tokyo, Japan.
· pubmed
DNA damage repair is a critical physiological process closely linked to aging. The accumulation of DNA damage in renal proximal tubular epithelial cells (PTEC) is related to a decline in kidney function. Here, we report that DNA double-strand breaks in PTECs lead to systemic meta...
DNA damage repair is a critical physiological process closely linked to aging. The accumulation of DNA damage in renal proximal tubular epithelial cells (PTEC) is related to a decline in kidney function. Here, we report that DNA double-strand breaks in PTECs lead to systemic metabolic dysfunction, including weight loss, reduced fat mass, impaired glucose tolerance with mitochondrial dysfunction, and increased inflammation in adipose tissues and the liver. Single-cell RNA sequencing analysis reveals expansion of CD11c+ Ccr2+ macrophages in the kidney cortex, liver, and adipose tissues and Ly6C
Longevity Relevance Analysis
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DNA damage in renal proximal tubular epithelial cells leads to systemic metabolic dysfunction through altered macrophage activity. The study addresses the role of DNA damage in aging-related kidney dysfunction and its systemic effects, which is pertinent to understanding the mechanisms of aging and potential interventions.
Weaver, R. R., Gray, A. L., Mateus-Gomes, S. ...
· neuroscience
· University of Manchester
· biorxiv
CXCL4 (PF4) is a chemokine stored in platelets that has pleiotropic effects across biological settings. These effects include driving of inflammation and fibrosis as well as reversal of the effects of ageing. We have recently demonstrated that CXCL4 function is driven, independen...
CXCL4 (PF4) is a chemokine stored in platelets that has pleiotropic effects across biological settings. These effects include driving of inflammation and fibrosis as well as reversal of the effects of ageing. We have recently demonstrated that CXCL4 function is driven, independently of known chemokine receptors, through binding to glycosaminoglycan (GAG) side chains on proteoglycans within the cell surface glycocalyx. In this study, we have used intravital imaging and radioactive tracer studies, in combination with an exogenous inhibitor and a GAG-binding CXCL4 mutant, to demonstrate that CXCL4 can enter the brain parenchyma of mice by binding to proteoglycans within the cell surface of the endothelial glycocalyx of the blood-brain barrier (BBB). Furthermore, we have also demonstrated that CXCL4 directly promotes neurogenesis in vitro, which is mediated by its ability to oligomerise and bind to GAGs. These findings provide a molecular mechanism for CXCL4 uptake and function within the brain. Furthermore, these data have important implications for understanding CXCL4 during health and disease that may enable development of CXCL4-related therapeutics for inflammatory diseases and ageing.
Longevity Relevance Analysis
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CXCL4 promotes neurogenesis in the brain by binding to glycosaminoglycans on the endothelial glycocalyx of the blood-brain barrier. The study addresses a mechanism that could potentially influence aging processes and neurogenesis, which are relevant to longevity research.
Nathalie Ringström, Charlotte Edling, Giovanna Nalesso ...
· Annals of the New York Academy of Sciences
· School of Veterinary Medicine, Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK.
· pubmed
The cardiac atrial extracellular matrix (ECM) is central to age-associated cardiac remodeling and subsequent decline in cardiac functioning. Despite this, the composition of the atrial ECM and how it changes with age is not yet known. This study utilized mass spectrometry to eval...
The cardiac atrial extracellular matrix (ECM) is central to age-associated cardiac remodeling and subsequent decline in cardiac functioning. Despite this, the composition of the atrial ECM and how it changes with age is not yet known. This study utilized mass spectrometry to evaluate the composition of murine atria in young (12 weeks) and old (77 weeks) C57BL/6J mice. The tissue was decellularized, ECM and ECM-associated proteins were extracted with GuHCl, and proteins were deglycosylated to enable identification of glycosylated peptides. Two hundred and thirty-seven ECM and ECM-associated proteins were found to be significantly differentially expressed with age. Some proteins (MMP9, S100A9, VWA3A, CTSD, CCL8) were more than threefold increased with age, proteoglycans were modestly decreased, while the overall collagen content was markedly decreased. STRING network mapping of physical associations predicted that both PLOD3 and PDGFA interact with the collagens that decreased with age. The results suggest that the mechanism behind age-associated atrial stiffness is not due to an increase in collagen content as previously believed, but an increase in cross-linking, potentially facilitated by PLOD3. Additionally, several of the significant proteins have not previously been associated with cardiac aging and thus are potential drug targets for age-associated cardiac fibrosis and other age-associated conditions.
Longevity Relevance Analysis
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The study claims that age-associated atrial stiffness is linked to decreased collagen content and increased cross-linking rather than an increase in collagen itself. This research is relevant as it explores the underlying mechanisms of cardiac aging, which could contribute to understanding and potentially mitigating age-related cardiac dysfunction.
Jeremy M Shea, Saul A Villeda
· Microglia
· Department of Anatomy, University of California, San Francisco, San Francisco, United States.
· pubmed
During aging, microglia - the resident macrophages of the brain - exhibit altered phenotypes and contribute to age-related neuroinflammation. While numerous hallmarks of age-related microglia have been elucidated, the progression from homeostasis to dysfunction during the aging p...
During aging, microglia - the resident macrophages of the brain - exhibit altered phenotypes and contribute to age-related neuroinflammation. While numerous hallmarks of age-related microglia have been elucidated, the progression from homeostasis to dysfunction during the aging process remains unresolved. To bridge this gap in knowledge, we undertook complementary cellular and molecular analyses of microglia in the mouse hippocampus across the adult lifespan and in the experimental aging model of heterochronic parabiosis. Single-cell RNA-Seq and pseudotime analysis revealed age-related transcriptional heterogeneity in hippocampal microglia and identified intermediate states of microglial aging that also emerge following heterochronic parabiosis. We tested the functionality of intermediate stress response states via TGFβ1 and translational states using pharmacological approaches in vitro to reveal their modulation of the progression to an activated state. Furthermore, we utilized single-cell RNA-Seq in conjunction with in vivo adult microglia-specific
Longevity Relevance Analysis
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The paper claims that intermediate states of microglial aging drive activation and cognitive decline in the hippocampus. This research is relevant as it investigates the underlying mechanisms of microglial aging, which could contribute to understanding and potentially mitigating age-related cognitive decline, thus addressing root causes of aging.
Joao Castro, Kira Fagerstrom, Stephen Treaster ...
· The journals of gerontology. Series A, Biological sciences and medical sciences
· Department of Orthopedic Surgery, Boston Children's Hospital; Department of Genetics, Harvard Medical School, Boston MA.
· pubmed
The decrease of tissue resiliency with aging is due, in part, to changes in the retention of stem cell/progenitor populations that act to restore and maintain tissue quality with age or injury. In mice, the Celsr1 gene has been identified as a regulator of quiescent stem cells, w...
The decrease of tissue resiliency with aging is due, in part, to changes in the retention of stem cell/progenitor populations that act to restore and maintain tissue quality with age or injury. In mice, the Celsr1 gene has been identified as a regulator of quiescent stem cells, while in zebrafish, celsr1a mutants demonstrate an essential function in maintaining adult stem cell populations within the highly proliferative tissues of the gut and skin. Here, we investigate the role of celsr1a as a regulator of adult skeletal stem cells and mediator of skeletal homeostasis and repair. We find that celsr1a is essential for maintenance of bone mineral density and volume in adult zebrafish. Using an enhancer screen to identify tissue/cell-specific regulators of celsr1a, we identified enhancers active in specific tissues that reflect the normal expression of celsr1a. We characterized C1a-A an enhancer that is active within stem/progenitor cells of diverse tissues. Consistent with this role, C1a-A marks specific cells in mature skeletal structures of the zebrafish, residing on the endosteal surface of zebrafish vertebrae and fin long-bones. These cells are limited in number and contribute to osteocyte populations within the bony matrix. Using a novel long bone fracture assay in adult zebrafish, we find that celsr1a positive skeletal cells respond to damage and that celsr1a function is essential for fracture healing. Our investigation details an unexpected role of cels1a in skeletal repair and quality with age and highlights a new regulator of stem cell activity in the skeleton.
Longevity Relevance Analysis
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Celsr1a is essential for the maintenance of bone mineral density and volume in adult zebrafish and plays a critical role in skeletal repair. The study addresses the regulation of stem cell activity in the context of aging and tissue homeostasis, which is directly related to understanding and potentially mitigating age-related decline in skeletal health.
HaiYang Wang
· Seminars in cell & developmental biology
· Institute of Modern Biology, Nanjing University, Nanjing 210008, China; Mechanobiology Institute, National University of Singapore, 5A Engineering Drive 1, 117411, Singapore. Electronic address: [email protected].
· pubmed
Granulosa cells (GCs) are essential for oocyte maturation, providing metabolic support, hormonal signaling, and structural integrity critical to successful follicular development. However, advancing age disrupts these functions, driven by factors such as increased oxidative stres...
Granulosa cells (GCs) are essential for oocyte maturation, providing metabolic support, hormonal signaling, and structural integrity critical to successful follicular development. However, advancing age disrupts these functions, driven by factors such as increased oxidative stress, mitochondrial dysfunction, and transcriptomic and proteomic alterations. These age-related changes in GCs contribute to compromised oocyte quality, diminished follicular support, and a decline in fertility, particularly in women of advanced maternal age. This review highlights recent progress in understanding the pivotal roles of GCs in maintaining oocyte health, with a focus on the mechanisms underlying their aging-related dysfunction. Furthermore, we explore promising therapeutic strategies, including antioxidant therapies, metabolic modulators, and GC-based rejuvenation techniques, aimed at mitigating the impacts of reproductive aging. By consolidating and analyzing existing research, this review provides valuable perspectives on fertility preservation and factors shaping reproductive outcomes in women of advanced maternal age.
Longevity Relevance Analysis
(4)
Granulosa cells play a crucial role in oocyte health and their aging-related dysfunction impacts fertility. The paper addresses mechanisms of aging in reproductive cells, which is directly related to understanding and potentially mitigating age-related decline in fertility, thus contributing to longevity research.
Zhang, L. J., Elsallabi, O., Soto-Palma, C. ...
· cell biology
· University of Minnesota
· biorxiv
Aging is marked by the accumulation of senescent cells (SnCs), which contribute to tissue dysfunction and age-related diseases. Senotherapeutics, including senolytics which specifically induce lysis of SnCs and senomorphics, which suppress the senescence phenotype, represent prom...
Aging is marked by the accumulation of senescent cells (SnCs), which contribute to tissue dysfunction and age-related diseases. Senotherapeutics, including senolytics which specifically induce lysis of SnCs and senomorphics, which suppress the senescence phenotype, represent promising therapeutic interventions for mitigating age-related pathologies and extending healthspan. Using a phenotypic-based senescent cell screening assay, we identified fucoidans, a class of sulfated polysaccharides derived from brown algae and seaweed, as novel senotherapeutics. In particular, fucoidan from Fucus vesiculosus (Fucoidan-FV) displayed potent senomorphic activity in different types of SnCs, reduced senescence in multiple tissues in aged mice, and extended healthspan in a mouse model of accelerated aging. Fucoidan-FV also enhanced the deacetylation and mono-ADP-ribosylation (mADPr) activity of SIRT6 and improved DNA repair and reduced senescence, in part, through SIRT6-dependent pathways. In addition, Fucoidan-FV downregulated genes associated with inflammation, Wnt signaling, and ECM remodeling pathways in SnCs and increased expression of genes involved with DNA repair. These findings support the translational potential of fucoidans as novel senotherapeutics that also are able to improve SIRT6-mediated DNA repair.
Longevity Relevance Analysis
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Fucoidans enhance SIRT6-dependent DNA repair and reduce senescence in aged mice. The paper addresses the root causes of aging by exploring senotherapeutics that target senescent cells, which are implicated in age-related dysfunction and diseases.
Katherine Cox, Gongyu Shi, Neve Read ...
· Aging cell
· Academic Unit of Ophthalmology, Translational Health Sciences, Bristol Medical School, University of Bristol, Bristol, UK.
· pubmed
Age is a primary risk factor for chronic conditions, including age-related macular degeneration (AMD). Impairments in autophagy processes are implicated in AMD progression, but the extent of autophagy's contribution and its therapeutic potential remain ambiguous. This study inves...
Age is a primary risk factor for chronic conditions, including age-related macular degeneration (AMD). Impairments in autophagy processes are implicated in AMD progression, but the extent of autophagy's contribution and its therapeutic potential remain ambiguous. This study investigated age-associated transcriptomic changes in autophagy pathways in the retinal pigment epithelium (RPE) and evaluated the protective effects of topical trehalose, an autophagy-enhancing small molecule, against light-induced outer retinal degeneration in mice. Transcriptomic analysis of human RPE/choroid and mouse RPE revealed consistent downregulation of autophagy pathways with age, alongside variable changes as AMD severity progressed. Given the age- and AMD-associated perturbation of autophagy pathways, we examined trehalose treatment in vitro, which enhanced autophagic flux and restored mitochondrial respiratory function in primary murine RPE cells exposed to oxidative stress. In vivo, topical trehalose improved autophagy-lysosome activity in mouse RPE, as demonstrated by elevated LC3B turnover and SQSTM1/p62 degradation. Furthermore, trehalose eyedrops protected mice from light-induced damage to the RPE and photoreceptors, preserving outer nuclear layer thickness, RPE morphology, and junctional F-actin organization. Taken together, the data support that age-related decline and severe dysregulation in autophagy contributed to AMD progression. By restoring autophagic flux, topical trehalose demonstrates therapeutic potential to address early autophagy-related pathological changes in AMD.
Longevity Relevance Analysis
(4)
The paper claims that topical trehalose can enhance autophagy and protect against age-related degeneration in the retinal pigment epithelium. The study addresses the decline of autophagy pathways with age, which is a fundamental aspect of aging and its associated diseases, suggesting a potential therapeutic approach to mitigate age-related macular degeneration.
Manna, A., Basak, P., MAJUMDER, C. ...
· biochemistry
· Bose Institute
· biorxiv
Heat shock factor 1 (HSF1) masters cellular proteostasis under stress by upregulating the expression of molecular chaperones that help refold or degrade the misfolded proteins. HSF1 activation involves a monomer-to-oligomer transition and binding to its recognition sequence, the ...
Heat shock factor 1 (HSF1) masters cellular proteostasis under stress by upregulating the expression of molecular chaperones that help refold or degrade the misfolded proteins. HSF1 activation involves a monomer-to-oligomer transition and binding to its recognition sequence, the heat shock elements (HSEs) on its target gene promoters. HSF1 activity declines with age as well as in neurodegenerative disorders (NDs) such as Parkinson disease, highlighting the need for strategies to restore its function. Azadiradione (AZD), a limonoid isolated from Azadirachta indica seeds, directly activates HSF1 in cellular and preclinical ND models, unlike other small-molecule activators reported elsewhere. We investigated the molecular basis of AZD-mediated HSF1 activation using purified variants of this protein including those without its oligomerization and transactivation domain. Fluorescence polarization and dynamic light scattering assays revealed that AZD promotes the oligomerization of monomeric HSF1 to enhance its HSE-binding affinity by engaging with its DNA-binding domain (DBD). The oligomerization domain known to be required for stress-induced activation, appears redundant in AZD-mediated activation. Furthermore, evidence suggests AZD-induced conformational alterations in the HSE facilitate its binding to the HSF1 monomer. Notably, AZD reduces the DNA-binding ability of pre-assembled oligomeric HSF1 by triggering its amyloid-like aggregation. This finding also highlighted a potential anticancer effect of AZD, as cancer cells heavily depend on this HSF1 population for rapid proliferation and survival. Overall, these findings offer novel insights into the functional regulation of HSF1 and suggest a framework for developing small-molecule HSF1 activators with therapeutic potential for protein conformation disorders.
Longevity Relevance Analysis
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Azadiradione activates Heat Shock Factor 1 by interacting with its DNA-binding domain, enhancing its function independent of the oligomerization domain. The paper is relevant as it explores a mechanism to restore HSF1 function, which declines with age and is implicated in age-related diseases, potentially addressing root causes of aging-related cellular dysfunction.
Aradhana Mohanty, Anjali Kumari, Lava Kumar S ...
· Aging cell
· BRIC-National Institute of Animal Biotechnology, Hyderabad, Telangana, India.
· pubmed
The quality and quantity of the ovarian reserve are meticulously regulated through various cell death pathways to guarantee the availability of high-quality oocytes for fertilization. While apoptosis is recognized for contributing to maintaining ovarian reserve, the involvement o...
The quality and quantity of the ovarian reserve are meticulously regulated through various cell death pathways to guarantee the availability of high-quality oocytes for fertilization. While apoptosis is recognized for contributing to maintaining ovarian reserve, the involvement of other cell death pathways remains unclear. Employing chemical genetics and proteomics, this study reveals the crucial involvement of Cathepsin B in maintaining the ovarian reserve. Results indicate that apoptosis and autophagy play pivotal roles, and inhibiting these pathways significantly increases follicle numbers. Proteomics reveals a dynamic shift from apoptosis to autophagy during follicular development, with Cathepsin B emerging as a key player in this transition. Inhibiting Cathepsin B not only mimics the augmented oocyte reserve observed with autophagy inhibition but also upregulated IGF1R and AKT-mTOR pathways without compromising fertility in pre- and postpubertal mice. Further, IGF1R inhibition partially compromised the protective effects of Cathepsin B inhibition on oocyte reserves, suggesting their interdependence. This association is further supported by the finding that Cathepsin B can degrade IGF1R in vitro. Moreover, the increased IGF1R levels enhance the oocyte mitochondrial membrane potential via transcriptional regulation of mitochondrial biogenesis and mitophagy genes. Remarkably, this Cathepsin B-dependent ovarian reserve maintenance mechanism is conserved in higher-order vertebrates. Cumulatively, our study sheds valuable light on the intricate interplay of autophagy, Cathepsin B, and growth factors in ovarian reserve maintenance, offering potential therapeutic strategies to delay ovarian aging and preserve fertility.
Longevity Relevance Analysis
(4)
Cathepsin B regulates ovarian reserve quality and quantity via mitophagy by modulating IGF1R turnover. The study addresses mechanisms that could potentially delay ovarian aging and preserve fertility, which are directly related to longevity research.
Steven R H Beach, Sierra E Carter, Mei Ling Ong ...
· Development and psychopathology
· Department of Psychology, University of Georgia, Athens, GA, USA.
· pubmed
Using the dual-pathway framework (Beach et al., a), we tested a Neuro-immune Network (NIN) hypothesis: i.e., that chronically elevated inflammatory processes may have delayed (i.e., incubation) effects on young adult substance use, leading to negative health outcomes. In a sample...
Using the dual-pathway framework (Beach et al., a), we tested a Neuro-immune Network (NIN) hypothesis: i.e., that chronically elevated inflammatory processes may have delayed (i.e., incubation) effects on young adult substance use, leading to negative health outcomes. In a sample of 449 participants in the Family and Community Health Study who were followed from age 10 to age 29, we examined a non-self-report index of young adult elevated alcohol consumption (EAC). By controlling self-reported substance use at the transition to adulthood, we were able to isolate a significant delayed (incubation) effect from childhood exposure to danger to EAC (β = -.157, p = .006), which contributed to significantly worse aging outomes. Indirect effects from danger to aging outcomes via EAC were: GrimAge (IE = .010, [.002, .024]), Cardiac Risk (IE = -.004, [-.011, -.001]), DunedinPACE (IE = .002, [.000, .008]). In exploratory analyses we examined potential sex differences in effects, showing slightly stronger incubation effects for men and slightly stronger effects of EAC on aging outcomes for women. Results support the NIN hypothesis that incubation of immune pathway effects contributes to elevated alcohol consumption in young adulthood, resulting in accelerated aging and elevated cardiac risk outcomes via health behavior.
Longevity Relevance Analysis
(4)
Childhood exposure to danger leads to increased alcohol consumption in young adults, which accelerates aging and elevates cardiac risk. The study explores the long-term effects of early life stressors on health outcomes, contributing to the understanding of how psychosocial factors can influence aging processes and age-related diseases.
Yun Haeng Lee, Hyunwoong Lim, Gyungmin Kim ...
· Cell proliferation
· Division of Life Sciences, Incheon National University, Incheon, Republic of Korea.
· pubmed
Senescent cells are characterised by increased glycolysis dependence. Normalisation of glycolysis metabolism is essential for senescence amelioration. However, the mechanism of proteins involved in cellular glycolysis metabolism has not been fully elucidated. Here, we identified ...
Senescent cells are characterised by increased glycolysis dependence. Normalisation of glycolysis metabolism is essential for senescence amelioration. However, the mechanism of proteins involved in cellular glycolysis metabolism has not been fully elucidated. Here, we identified a candidate compound, an oxazole analogue (KB2764), that can improve senescence. To elucidate the mechanism of the KB2764, we investigated the interacting proteins. KB2764 interacted with alpha-enolase (ENO1) and pyruvate kinase M (PKM), ultimately allowing PKM to phosphorylate ENO1. KB2764 consequently increased mitochondrial ATP production and reduced reliance on glycolysis. Knockdown of the ENO1 experiment in senescent cells demonstrates that regulation of ENO1 activity is a prerequisite for recovery of mitochondrial function. Furthermore, the action of KB2764 extends its application to extend the lifespan of Caenorhabditis elegans. Taken together, our findings reveal a novel mechanism by which senescence is ameliorated through metabolic reprogramming and mitochondrial functional recovery via KB2764-mediated regulation of ENO1 protein activity.
Longevity Relevance Analysis
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The paper claims that KB2764 improves senescence by regulating alpha-enolase activity, leading to enhanced mitochondrial function and lifespan extension in C. elegans. This research addresses metabolic reprogramming as a potential mechanism for ameliorating senescence, which is directly related to the aging process and longevity.
Agnès Conjard-Duplany, Alexis Osseni, Aline Lamboux ...
· TOR Serine-Threonine Kinases
· Laboratoire Physiopathologie et Génétique du Neurone et du Muscle (PGNM), Institut NeuroMyoGène, Université Claude Bernard Lyon 1, INSERM U1315, CNRS UMR 5261, 8 avenue Rockefeller, Lyon, 69008, France. [email protected].
· pubmed
Balanced mTOR activity and iron levels are crucial for muscle integrity, with evidence suggesting mTOR regulates cellular iron homeostasis. In this study, we investigated iron metabolism in muscle-specific mTOR knockout mice (mTORmKO) and its relation to their myopathy. The mTORm...
Balanced mTOR activity and iron levels are crucial for muscle integrity, with evidence suggesting mTOR regulates cellular iron homeostasis. In this study, we investigated iron metabolism in muscle-specific mTOR knockout mice (mTORmKO) and its relation to their myopathy. The mTORmKO mice exhibited distinct iron content patterns across muscle types and ages. Slow-twitch soleus muscles initially showed reduced iron levels in young mice, which increased with the dystrophy progression but remained within control ranges. In contrast, the less affected fast-twitch muscles maintained near-normal iron levels from a young age. Interestingly, both mTORmKO muscle types exhibited iron metabolism markers indicative of iron excess, including decreased transferrin receptor 1 (TFR1) and increased levels of ferritin (FTL) and ferroportin (FPN) proteins. Paradoxically, these changes were accompanied by downregulated Ftl and Fpn mRNA levels, indicating post-transcriptional regulation. This discordant regulation resulted from disruption of key iron metabolism pathways, including NRF2/NFE2L2, HIFs, and AKT/PKB signaling. Mechanistically, mTOR deficiency impaired transcriptional regulation of iron-related genes mediated by NRF2 and HIFs. Furthermore, it triggered ferritin accumulation through two NRF2 mechanisms: (1) derepression of ferritin translation via suppression of the FBXL5-IRP axis, and (2) autophagosomal sequestration driven by NCOA4-dependent ferritin targeting to autophagosomes, coupled with age-related impairments of autophagy linked to chronic AKT/PKB activation. Three-week spermidine supplementation in older mTORmKO mice was associated with normalized AKT/PKB-FOXO signaling, increased endolysosomal FTL and reduced total FTL levels in the dystrophic soleus muscle. These findings underscore mTOR's crucial role in skeletal muscle iron metabolism and suggest spermidine as a potential strategy to address impaired ferritinophagy due to autophagy blockade in dystrophic muscle.
Longevity Relevance Analysis
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The paper claims that mTOR deficiency disrupts iron metabolism in muscle, leading to myopathy, and suggests spermidine supplementation as a potential intervention. This research is relevant as it explores the role of mTOR in muscle health and iron homeostasis, which are critical factors in aging and age-related muscle degeneration.
Yuan, Y., Dyer, C., Knight, R. D.
· cell biology
· King\\\'s College London
· biorxiv
Ageing progressively impairs skeletal muscle regeneration, contributing to reduced mobility and quality of life in the ageing population. Whilst the molecular changes underlying muscle ageing have been well characterised, their impact on muscle stem cell (muSC) behaviour during r...
Ageing progressively impairs skeletal muscle regeneration, contributing to reduced mobility and quality of life in the ageing population. Whilst the molecular changes underlying muscle ageing have been well characterised, their impact on muscle stem cell (muSC) behaviour during regeneration remains poorly understood. Here, we leverage the telomerase-deficient tert mutant zebrafish larvae as an in vivo model of accelerated ageing to perform real-time analysis of muSC dynamics following muscle injury. We demonstrate that the ageing-like inflammatory environment in tert mutant disrupts muSC migration, impairs activation and proliferation, and compromises regenerative capacity. We further show that sustained inflammation, mediated by persistent macrophage presence and elevated matrix metalloproteinase (MMP) activity directly limits muSC recruitment and migration efficiency. Pharmacological inhibition of MMP9/13 activity and genetic depletion of macrophages partially restore muSC migratory behaviour and regenerative outcomes. Notably, we demonstrate that muSC migration dynamics correlate with regenerative success, providing a functional readout for therapeutic screening. Our findings reveal zebrafish tert mutants offer a tractable system for dissecting age-associated changes to cell behaviour and for identifying rejuvenation interventions.
Longevity Relevance Analysis
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The paper claims that pharmacological inhibition of MMP activity can restore muscle stem cell migratory behavior and regenerative outcomes in a telomerase-deficient zebrafish model of aging. This research addresses the mechanisms of muscle regeneration impairment due to aging, which is a fundamental aspect of longevity and age-related decline.
Yiyang Huang, Jiannan Mao, Ziang Li ...
· Advanced materials (Deerfield Beach, Fla.)
· Department of Orthopedics, First Affiliated Hospital of Soochow University, Orthopedic Institute, Soochow University, 188 Shizi Road, Suzhou, Jiangsu, 215006, P. R. China.
· pubmed
The aging microenvironment promotes persistent inflammation and loss of intrinsic regenerative capacity. These are major obstacles to effective bone tissue repair in older adults. This study aims to explore how physical thermal stimulation can effectively delay the bone marrow me...
The aging microenvironment promotes persistent inflammation and loss of intrinsic regenerative capacity. These are major obstacles to effective bone tissue repair in older adults. This study aims to explore how physical thermal stimulation can effectively delay the bone marrow mesenchymal stem cells (BMSCs) aging process. Based on this, an implantable physical signal-converter platform is designed as a therapeutic system that enables stable heat signals at the bone injury site under ultrasound stimulation (US). It is found that the therapeutic platform controllably reduces the mitochondrial outer membrane permeabilization of aging BMSCs, bidirectionally inhibiting mitochondrial reactive oxygen species and mitochondrial DNA (mtDNA) leakage. The leakage ratio of mtDNA decreases by 22.7%. This effectively mitigates the activation of the cGAS-STING pathway and its downstream NF-κB signaling induced by oxidative stress in aging BMSCs, thereby attenuating the pathological advancement of chronic inflammation. Thus, it effectively restores the metabolism and osteogenic differentiation of aging BMSCs in vitro, which is further confirmed in a rat model. In the GMPG/US group, the bone mineral density increases 2-3 times at 4 weeks in the rats femoral defect model. Therefore, this ultrasound-based signal-conversion platform provides a promising strategy for aging bone defect repair.
Longevity Relevance Analysis
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The paper claims that an implantable physical signal-converter platform can improve the healing of aging bone by enhancing the mitochondrial function of bone marrow mesenchymal stem cells. This research addresses a fundamental aspect of aging by exploring a method to restore regenerative capacity in aging tissues, which is directly related to longevity and age-related degeneration.
Dion, W., Tao, Y., Chambers, M. ...
· cell biology
· University of Pittsburgh
· biorxiv
Current treatments targeting individual protein quality control have limited efficacy in alleviating proteinopathies, highlighting the prerequisite for a common upstream druggable target capable of global proteostasis modulation. Building on our prior research establishing nuclea...
Current treatments targeting individual protein quality control have limited efficacy in alleviating proteinopathies, highlighting the prerequisite for a common upstream druggable target capable of global proteostasis modulation. Building on our prior research establishing nuclear speckles as a pivotal membrane-less organelle responsible for global proteostasis transcriptional control, we aim to alleviate proteinopathies through nuclear speckle rejuvenation. We identified pyrvinium pamoate as a small-molecule nuclear speckle rejuvenator that enhances protein quality control while suppressing YAP1 signaling via decreasing the surface/interfacial tension of nuclear speckle condensates through interaction with the intrinsically disordered region of nuclear speckle scaffold protein SON. In pre-clinical models, nanomolar pyrvinium pamoate alleviated retina degeneration and reduced tauopathy by promoting autophagy and ubiquitin-proteasome system in a SON-dependent manner without causing cellular stress. Aberrant nuclear speckle morphology, reduced protein quality control and increased YAP1 activity were also observed in human tauopathies. Our study uncovers novel therapeutic targets for tackling protein misfolding disorders within an expanded proteostasis framework encompassing nuclear speckles and YAP1.
Longevity Relevance Analysis
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The paper claims that pyrvinium pamoate rejuvenates nuclear speckles to enhance protein quality control and alleviate proteinopathies. This research addresses a potential upstream target for improving proteostasis, which is relevant to the underlying mechanisms of aging and age-related diseases.
Wu, H., Wang, L., Chen, H. ...
· geriatric medicine
· Nanchang University
· medrxiv
BackgroundThe increasing prevalence of depression and functional disability in older adults highlights the need for targeted interventions, with sleep as a potentially modifiable factor, yet the longitudinal effects and mediating role of sleep remain poorly understood.
MethodsTh...
BackgroundThe increasing prevalence of depression and functional disability in older adults highlights the need for targeted interventions, with sleep as a potentially modifiable factor, yet the longitudinal effects and mediating role of sleep remain poorly understood.
MethodsThis review and conceptual framework aimed to examine the pairwise bidirectional associations between sleep, depression, and functional disability and identify the longitudinal mediating role of sleep in the bidirectional relationship between depression and functional disability in older adults. The academic databases PsycArticles, PubMed, MEDLINE, Science Citation Index, Social Sciences Citation Index, ProQuest Dissertations and Theses Global, Cochrane, and Scopus were searched for research published in English between January 2000 and June 2024. Systematic review and cohort study designs were eligible. All included studies were assessed for quality using the Critical Appraisal Skill Programme checklist (CASP 2024).
Results397,289 citations were identified, and 82 studies meeting the inclusion criteria were included. Cohort studies and reviews provide evidence that there is a dynamic reciprocal correlation between sleep, depression, and functional disability in the older population. We propose that sleep may increase the risk of depression and functional disability in the follow-up years, with sleep acting as a potential mediating factor between depression and functional disability. There was a selection bias in the study samples, as most studies focused on specific populations or regions. Moreover, some of the cohort studies included lacked sufficient follow-up time to observe long-term effects.
ConclusionsThis review and conceptual framework highlight that sleep health can provide crucial insights for mitigating the adverse effects experienced by older adults due to depression and functional disability. For healthcare professionals and policymakers, it provides evidence about prioritizing sleep health as an accessible step to foster a healthy lifestyle.
PROSPERO registration number CRD42024556536.
What is already known on this topicWith the increasing aging population, improving the physical and mental health of older adults has become a key social issue. Substantial epidemiological studies have confirmed the existence of bidirectional relationships between depression, sleep disorders, and functional disability in older adults, with all three variables influencing each other. However, the complex interaction mechanisms among these three variables remain unclear, and further research is needed to explore whether sleep plays a longitudinal mediating role between depression and functional disability.
What this study addsThis study significantly enhances our understanding by providing robust evidence of the dynamic, bidirectional relationships among sleep, depression, and functional disability in older adults. Unlike previous research that primarily examined pairwise relationships, our study delves deeper by proposing a comprehensive conceptual framework. This framework underscores the potential mediating role of sleep, suggesting that sleep disturbances are not merely consequences of depression and functional disability but also active contributors to their interaction and progression. By elucidating these underlying mechanisms and potential pathways, our study sheds light on the complex interplay among these three variables, ultimately enhancing the quality of life for older adults.
How this study might affect research, practice or policyThis study paves the way for deeper investigation into the causal mechanisms connecting sleep, depression, and functional disability. It highlights the critical importance of prioritizing resources for sleep-related research and interventions, recognizing their significant potential to enhance the well-being of an aging population. This holistic approach aims to foster a more comprehensive understanding and effective strategies for promoting healthy aging.
Longevity Relevance Analysis
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Sleep disturbances may act as a mediating factor between depression and functional disability in older adults. The paper is relevant as it explores the interplay between sleep, depression, and functional disability, which are critical factors affecting the quality of life and health outcomes in the aging population.